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fixed wrongly parsed single-tip trees (issue 124) #169

fixed wrongly parsed single-tip trees (issue 124)

fixed wrongly parsed single-tip trees (issue 124) #169

Triggered via push July 22, 2024 09:12
Status Failure
Total duration 3h 54m 33s
Artifacts 1

revdepcheck.yml

on: push
Matrix: mem-check
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6 errors and 15 warnings
revdepcheck Depends, macOS, R release
No such keg: /opt/homebrew/Cellar/r
revdepcheck Suggests, macOS, R release
No such keg: /opt/homebrew/Cellar/r
revdepcheck Imports, macOS, R release
No such keg: /opt/homebrew/Cellar/r
revdepcheck Imports, macOS, R release
# MicrobiomeBenchmarkData
revdepcheck Imports, macOS, R release
Process completed with exit code 1.
revdepcheck Depends, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Depends, macOS, R release
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Depends, macOS, R release
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
revdepcheck Depends, macOS, R release
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
revdepcheck Depends, macOS, R release
dependencies ‘graph’, ‘Biostrings’, ‘seqLogo’, ‘MassSpecWavelet’, ‘Biobase’, ‘BiocVersion’, ‘BiocStyle’, ‘marray’, ‘affy’, ‘limma’, ‘rnaturalearthhires’, ‘starsdata’, ‘spDataLarge’, ‘biglmm’, ‘Rgraphviz’, ‘ComplexHeatmap’, ‘cmdstanr’, ‘glmmADMB’, ‘snpStats’, ‘INLA’, ‘sylly.de’, ‘sylly.es’, ‘taxidata’, ‘M3C’, ‘globaltest’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘RandomFields’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘ExactData’, ‘cairoDevice’, ‘RGtk2’, ‘RDCOMClient’, ‘Icens’, ‘sangerseqR’, ‘loe’, ‘rhdf5’, ‘mixOmics’, ‘IRanges’, ‘RTCGA.rnaseq’, ‘genefilter’, ‘sva’ are not available
revdepcheck Suggests, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Suggests, macOS, R release
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Suggests, macOS, R release
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
revdepcheck Suggests, macOS, R release
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
revdepcheck Suggests, macOS, R release
dependencies ‘graph’, ‘Biostrings’, ‘seqLogo’, ‘MassSpecWavelet’, ‘Biobase’, ‘BiocVersion’, ‘BiocStyle’, ‘marray’, ‘affy’, ‘limma’, ‘rnaturalearthhires’, ‘starsdata’, ‘spDataLarge’, ‘biglmm’, ‘Rgraphviz’, ‘ComplexHeatmap’, ‘cmdstanr’, ‘glmmADMB’, ‘snpStats’, ‘INLA’, ‘sylly.de’, ‘sylly.es’, ‘taxidata’, ‘M3C’, ‘globaltest’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘RandomFields’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘ExactData’, ‘cairoDevice’, ‘RGtk2’, ‘RDCOMClient’, ‘Icens’, ‘sangerseqR’, ‘loe’, ‘rhdf5’, ‘mixOmics’, ‘IRanges’, ‘RTCGA.rnaseq’, ‘genefilter’, ‘sva’ are not available
revdepcheck Imports, macOS, R release
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
revdepcheck Imports, macOS, R release
The following actions uses Node.js version which is deprecated and will be forced to run on node20: actions/checkout@v2, actions/cache@v2. For more info: https://github.blog/changelog/2024-03-07-github-actions-all-actions-will-run-on-node20-instead-of-node16-by-default/
revdepcheck Imports, macOS, R release
pkg-config 0.29.2_3 is already installed and up-to-date. To reinstall 0.29.2_3, run: brew reinstall pkg-config
revdepcheck Imports, macOS, R release
HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK is set: not checking for outdated dependents or dependents with broken linkage!
revdepcheck Imports, macOS, R release
dependencies ‘graph’, ‘Biostrings’, ‘seqLogo’, ‘MassSpecWavelet’, ‘Biobase’, ‘BiocVersion’, ‘BiocStyle’, ‘marray’, ‘affy’, ‘limma’, ‘rnaturalearthhires’, ‘starsdata’, ‘spDataLarge’, ‘biglmm’, ‘Rgraphviz’, ‘ComplexHeatmap’, ‘cmdstanr’, ‘glmmADMB’, ‘snpStats’, ‘INLA’, ‘sylly.de’, ‘sylly.es’, ‘taxidata’, ‘M3C’, ‘globaltest’, ‘Rcampdf’, ‘tm.lexicon.GeneralInquirer’, ‘RandomFields’, ‘gurobi’, ‘rrelaxiv’, ‘biomaRt’, ‘KEGGgraph’, ‘ExactData’, ‘cairoDevice’, ‘RGtk2’, ‘RDCOMClient’, ‘Icens’, ‘sangerseqR’, ‘loe’, ‘rhdf5’, ‘mixOmics’, ‘IRanges’, ‘RTCGA.rnaseq’, ‘genefilter’, ‘sva’ are not available

Artifacts

Produced during runtime
Name Size
revdep-Imports-results Expired
5.18 KB