Friends don't let friends make certain types of data visualization - What are they and why are they bad.

simple tools for data cleaning in R

Apply Mapping Functions in Parallel using Futures

A grammar of graphics for comparative genomics

A geom for ggplot to create bump plots

ggplot2 extension for alluvial plots

Summarize, Analyze and Visualize MAF files from TCGA or in-house studies.

Interactive Heat Maps for R Using plotly

Combination matrix axis for 'ggplot2' to create 'UpSet' plots

Easy memoisation for R

An R package to simulate colorblindness on R figures.

Get You to Your Desired Plot Faster

Manipulate CSV files on the command line using dplyr

Multi-Omics Factor Analysis

Quality control for MinION sequencing data

🚀 R package: future.apply - Apply Function to Elements in Parallel using Futures

R package for the joint analysis of multiple single-cell RNA-seq datasets

Automated, probabilistic assignment of cell types in scRNA-seq data

Dark mode for ggplot2 themes

Interfaces for Multivariate Analysis in R

3d extension to ggplot

Simple statistical identification and removal of contaminants in marker-gene and metagenomics sequencing data

🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R https://shixiangwang.github.io/sigminer/reference/index.html

Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.

deconstructSigs

Copy number calling and variant classification using targeted short read sequencing

Reference-free profiling of polyploid genomes

Analysis pipeline for cancer sequencing data

Genome Interval Arithmetic in R