Releases: eastgenomics/egg4_dias_TWE_config
Releases · eastgenomics/egg4_dias_TWE_config
v3.1.8
Updated to use TWE VEP config v1.1.20
Testing info can be found here: https://cuhbioinformatics.atlassian.net/wiki/spaces/DV/pages/3398959140/dias_TWE_config_GRCh37_v3.1.8.json
v3.1.7
v3.1.6
v3.1.5
v3.1.4
v3.1.3
Changes:
- Fix for the eggd_optimised_filtering filter string to:
- allow the filter to include variants with a CLNSIG value containing “Pathogenic” (case-sensitive) or “Likely_pathogenic” (case-insensitive)
- use the correct syntax for case-insensitive pattern matching
- update to use the latest TWE VEP config
twe_vep_config_v1.1.16.json
Testing page:
https://cuhbioinformatics.atlassian.net/wiki/spaces/DV/pages/3251011625/dias+TWE+config+GRCh37+v3.1.3.json
v3.1.2
v3.1.1
Updated to use latest:
- twe_vep_config_v1.1.14.json
- dias_reports_v2.2.1
- 240402_g2t.tsv
- 240405_genepanels.tsv
See testing doc for more information:
https://cuhbioinformatics.atlassian.net/wiki/spaces/DV/pages/3165356112/dias+TWE+config+GRCh37+v3.1.1.json
v3.0.3
- Uses new reports workflow dias_reports_workflow_v2.1.1
- 2.1.1 reports workflow uses new eggd_generate_variant_workbook 2.8.0, so the new config has all the required inputs for 2.8.0 of workbooks.
v3.0.2
Changes:
- Update version number to dias_TWE_config_GRCh37_v3.0.2.json
- Vep config updated to v1.1.12
- Removed egg4_config_v2.1.6.py
- Update the README.md to reflect latest names/versions used in the config
Confluence page: https://cuhbioinformatics.atlassian.net/wiki/spaces/DV/pages/3078553601/dias+TWE+config+GRCh37+v3.0.2.json