update to use latest twe vep config v1.1.18

eastgenomics · Jul 30, 2024 · 962c721 · 962c721
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diff --git a/README.md b/README.md
@@ -1,4 +1,4 @@
-# dias_TWE_config_GRCh37_v3.1.5.json
+# dias_TWE_config_GRCh37_v3.1.6.json
 
 This repo contains a JSON config file which is used with eggd_dias_batch to specify inputs for running the Dias pipeline for TWE data.
 
@@ -32,4 +32,4 @@ Dynamic files:
 | genes2transcripts | **240402_g2t.tsv** | `file-Gj770X8433Gb506pjq1PxXG9` |
 | panel_dump for eggd_optimised_filtering | **240202_panelapp_dump.json** | `file-Gg35Vf845B5bV08VqJ0qGV5V` |
 | exons_with_symbols for eggd_athena | **GCF_000001405.25_GRCh37.p13_genomic.symbols.exon_5bp_v2.0.0.tsv** | `file-GF611Z8433Gf99pBPbJkV7bq` |
-| twe_vep_config for SNV reports | **twe_vep_config_v1.1.17.json** | `file-GkkB1104j4fkvqqvjJz77zvG` |
+| twe_vep_config for SNV reports | **twe_vep_config_v1.1.18.json** | `ffile-GpQQf204j4fykF6gKgZPJjp1` |
diff --git a/dias_TWE_config_GRCh37_v3.1.5.json → dias_TWE_config_GRCh37_v3.1.6.json b/dias_TWE_config_GRCh37_v3.1.5.json → dias_TWE_config_GRCh37_v3.1.6.json
@@ -1,6 +1,6 @@
 {
     "assay": "TWE",
-    "version": "3.1.5",
+    "version": "3.1.6",
     "artemis_app_id": "app-GkbJ7p0463bjk9VKv3x8G5F8",
     "snv_report_workflow_id": "workflow-GkbJY284FpfgqF8ggz57fVY2",
     "reference_files": {
@@ -32,7 +32,7 @@
                 "stage-rpt_vep.config_file": {
                     "$dnanexus_link": {
                         "project": "project-Fkb6Gkj433GVVvj73J7x8KbV",
-                        "id": "file-GkkB1104j4fkvqqvjJz77zvG"
+                        "id": "file-GpQQf204j4fykF6gKgZPJjp1"
                     }
                 },
                 "stage-rpt_vep.vcf": {