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af03544
update changeSuffix to rename metadata files
Remi-Gau Feb 12, 2022
824a979
change default argument type for mancoreg
Remi-Gau Feb 13, 2022
69f7ed0
make returnModelNode more flexible
Remi-Gau Feb 13, 2022
82320be
make sure that bidsRemoveDummies only works on niftii files
Remi-Gau Feb 13, 2022
ca06f5d
expand test coverage for returnModelMode
Remi-Gau Feb 13, 2022
cd0ce12
lint
Remi-Gau Feb 13, 2022
24fdbe8
fix conflicts
Remi-Gau Feb 13, 2022
a875254
make convertOnsetToMat more flexible by accepting inputs from any eve…
Remi-Gau Feb 13, 2022
16985ad
make sure remove dummies only work on non processed files
Remi-Gau Feb 13, 2022
1847035
refactor transformers
Remi-Gau Feb 13, 2022
02798b7
start making transformers change TSV content directly
Remi-Gau Feb 13, 2022
8a2613d
implement add / or filters
Remi-Gau Feb 13, 2022
32313f3
add Select, Delete and Rename filters
Remi-Gau Feb 13, 2022
e283bf8
implement Threshold transformers
Remi-Gau Feb 13, 2022
ca108d1
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Feb 13, 2022
f1a1514
refactor basic transformers
Remi-Gau Feb 13, 2022
8554a88
filter transformer outputs values and not a logical
Remi-Gau Feb 13, 2022
4995cbf
add Replace transformers
Remi-Gau Feb 13, 2022
0fc34c8
refactor Replace transformer
Remi-Gau Feb 13, 2022
90efa43
more refactoring
Remi-Gau Feb 13, 2022
ed842bc
add more tests
Remi-Gau Feb 13, 2022
44d5df1
apply transformers to create new onsets file
Remi-Gau Feb 13, 2022
7740517
fix test
Remi-Gau Feb 23, 2022
920ebe9
Merge branch 'dev' into removeDummies
Remi-Gau Feb 23, 2022
3ba4337
Merge branch 'dev' into removeDummies
Remi-Gau Feb 23, 2022
7dc0248
add concatenate transformer
Remi-Gau Feb 23, 2022
6e28e56
update help sections
Remi-Gau Feb 23, 2022
78d84a7
fix pretty print
Remi-Gau Feb 23, 2022
24688b4
fix convert events to onsets.mat
Remi-Gau Feb 23, 2022
14aa8a9
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Feb 23, 2022
169eea7
fix tests bids model
Remi-Gau Feb 23, 2022
359918c
Merge branch 'removeDummies' of https://github.com/cpp-lln-lab/CPP_SP…
Remi-Gau Feb 23, 2022
81b52e4
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Feb 23, 2022
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2 changes: 1 addition & 1 deletion lib/mancoreg/mancoreg.m
Original file line number Diff line number Diff line change
Expand Up @@ -59,7 +59,7 @@ function mancoreg(varargin)

is_file = @(x) exist(x, 'file')==2;

default_sliderStep = '0.01';
default_sliderStep = 0.01;
default_file = [];

addParameter(p, 'targetimage', default_file, is_file);
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6 changes: 3 additions & 3 deletions miss_hit.cfg
Original file line number Diff line number Diff line change
Expand Up @@ -31,7 +31,7 @@ copyright_entity: "Stephan Heunis"
tab_width: 2

# metrics limit for the code quality (https://florianschanda.github.io/miss_hit/metrics.html)
metric "cnest": limit 4
metric "file_length": limit 400
metric "cyc": limit 14
metric "cnest": limit 5
metric "file_length": limit 500
metric "cyc": limit 20
metric "parameters": limit 7
2 changes: 1 addition & 1 deletion src/batches/stats/setBatchSubjectLevelGLMSpec.m
Original file line number Diff line number Diff line change
Expand Up @@ -89,7 +89,7 @@
for iRun = 1:nbRuns

if ~strcmp(runs{iRun}, '')
printToScreen(sprintf(1, 'Processing run %s\n', runs{iRun}), opt);
printToScreen(sprintf('\n Processing run %s\n', runs{iRun}), opt);
end

spmSess(spmSessCounter).scans = getBoldFilenameForFFX(BIDS, opt, subLabel, iSes, iRun);
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