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Added no regression tests for provenance #150

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merged 47 commits into from
Jun 3, 2023

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LanderOtto
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This PR adds some no regression tests on the provenance module

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codecov-commenter commented May 28, 2023

Codecov Report

Patch coverage: 88.00% and project coverage change: -0.81 ⚠️

Comparison is base (dde9d5a) 65.41% compared to head (7017628) 64.61%.

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Additional details and impacted files
@@            Coverage Diff             @@
##           master     #150      +/-   ##
==========================================
- Coverage   65.41%   64.61%   -0.81%     
==========================================
  Files          81       81              
  Lines        9771     9974     +203     
  Branches     2312     2344      +32     
==========================================
+ Hits         6392     6445      +53     
- Misses       2979     3126     +147     
- Partials      400      403       +3     
Impacted Files Coverage Δ
streamflow/core/persistence.py 100.00% <ø> (ø)
streamflow/workflow/utils.py 84.37% <66.66%> (-4.09%) ⬇️
streamflow/workflow/combinator.py 87.37% <80.95%> (-3.61%) ⬇️
streamflow/cwl/transformer.py 81.37% <85.71%> (+1.51%) ⬆️
streamflow/workflow/step.py 80.25% <87.80%> (+0.62%) ⬆️
streamflow/core/workflow.py 91.58% <100.00%> (+0.05%) ⬆️
streamflow/cwl/combinator.py 100.00% <100.00%> (ø)
streamflow/cwl/processor.py 88.33% <100.00%> (ø)
streamflow/cwl/step.py 91.62% <100.00%> (ø)
streamflow/persistence/sqlite.py 79.90% <100.00%> (+0.96%) ⬆️
... and 1 more

... and 6 files with indirect coverage changes

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streamflow/workflow/utils.py Outdated Show resolved Hide resolved
streamflow/persistence/sqlite.py Outdated Show resolved Hide resolved
@@ -17,6 +17,7 @@ def _add_to_list(
token_values: MutableMapping[str, MutableMapping[str, MutableSequence[Any]]],
port_name: str,
depth: int = 0,
is_cartesian: bool = False,
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What does this is_cartesian parameter do?

streamflow/workflow/step.py Outdated Show resolved Hide resolved
streamflow/workflow/step.py Outdated Show resolved Hide resolved
streamflow/workflow/combinator.py Show resolved Hide resolved
streamflow/cwl/combinator.py Outdated Show resolved Hide resolved
streamflow/cwl/combinator.py Outdated Show resolved Hide resolved
streamflow/workflow/combinator.py Outdated Show resolved Hide resolved
streamflow/workflow/combinator.py Outdated Show resolved Hide resolved
streamflow/workflow/step.py Outdated Show resolved Hide resolved
@GlassOfWhiskey GlassOfWhiskey merged commit f44be46 into alpha-unito:master Jun 3, 2023
@LanderOtto LanderOtto deleted the test/provenance branch September 10, 2023 12:34
@LanderOtto LanderOtto mentioned this pull request Dec 22, 2023
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3 participants