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Widen Optimization compat to v4, and related packages accordingly #2327

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merged 1 commit into from
Sep 25, 2024

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@mhauru mhauru commented Sep 23, 2024

Supersedes a bunch of CompatHelper PRs that did this bit-by-bit.

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codecov bot commented Sep 23, 2024

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 57.43%. Comparing base (78d110a) to head (bd8a237).
Report is 2 commits behind head on master.

❗ There is a different number of reports uploaded between BASE (78d110a) and HEAD (bd8a237). Click for more details.

HEAD has 3 uploads less than BASE
Flag BASE (78d110a) HEAD (bd8a237)
111 108
Additional details and impacted files
@@             Coverage Diff             @@
##           master    #2327       +/-   ##
===========================================
- Coverage   86.80%   57.43%   -29.38%     
===========================================
  Files          24       24               
  Lines        1599     1588       -11     
===========================================
- Hits         1388      912      -476     
- Misses        211      676      +465     

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Pull Request Test Coverage Report for Build 10990803250

Details

  • 0 of 0 changed or added relevant lines in 0 files are covered.
  • 460 unchanged lines in 13 files lost coverage.
  • Overall coverage decreased (-29.3%) to 57.758%

Files with Coverage Reduction New Missed Lines %
src/mcmc/emcee.jl 2 90.2%
src/variational/VariationalInference.jl 4 14.29%
src/mcmc/gibbs.jl 4 94.05%
src/mcmc/particle_mcmc.jl 10 87.84%
src/mcmc/gibbs_conditional.jl 12 0.0%
src/mcmc/Inference.jl 18 77.3%
ext/TuringDynamicHMCExt.jl 29 0.0%
src/mcmc/mh.jl 32 57.43%
ext/TuringOptimExt.jl 50 0.0%
src/variational/advi.jl 53 0.0%
Totals Coverage Status
Change from base Build 10703372980: -29.3%
Covered Lines: 912
Relevant Lines: 1579

💛 - Coveralls

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Lovely @mhauru :)

@penelopeysm penelopeysm merged commit 1c98784 into master Sep 25, 2024
57 of 60 checks passed
@penelopeysm penelopeysm deleted the mhauru/optimization4-compat branch September 25, 2024 11:19
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merging so that compathelper doesn't reopen the same prs again

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mhauru commented Sep 25, 2024

The tests seemed to be failing. Did we understand why?

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Seems to be upstream method ambiguities JuliaDiff/ForwardDiff.jl#681

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Will revert

penelopeysm added a commit that referenced this pull request Sep 25, 2024
penelopeysm added a commit that referenced this pull request Sep 26, 2024
@penelopeysm penelopeysm restored the mhauru/optimization4-compat branch September 26, 2024 10:29
penelopeysm added a commit that referenced this pull request Sep 27, 2024
@yebai yebai deleted the mhauru/optimization4-compat branch October 23, 2024 16:22
penelopeysm added a commit that referenced this pull request Oct 24, 2024
* Reapply "Bump Optimization to v4, and related packages accordingly (#2327)" (#2343)

This reverts commit 3c91eec.

* Unmark Mooncake as broken on Optimization v4

---------

Co-authored-by: Markus Hauru <markus@mhauru.org>
Co-authored-by: Hong Ge <3279477+yebai@users.noreply.github.com>
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4 participants