Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Merge Duplicate Mitochondrial Linoleic and Gamma-Linolenic Acid Beta-Oxidation Pathways #793

Merged
merged 22 commits into from
Apr 23, 2024
Merged

Merge Duplicate Mitochondrial Linoleic and Gamma-Linolenic Acid Beta-Oxidation Pathways #793

Show file tree
Hide file tree
Changes from 19 commits
Commits
Show all changes
22 commits
Select commit Hold shift + click to select a range
44046bf
fix: remove MAR05358 for duplicating MAR03452+MAR03453+MAR03454+MAR03455
Devlin-Moyer Dec 28, 2023
3cc9c20
fix: remove MAR05195 for duplicating MAR03456
Devlin-Moyer Dec 28, 2023
6f58fd4
fix: remove MAR05302 for duplicating MAR03457
Devlin-Moyer Dec 28, 2023
73fb11d
fix: remove MAR05229 for duplicating MAR03458
Devlin-Moyer Dec 28, 2023
d9a35a6
fix: remove MAR05208 for duplicating MAR03281+MAR03282+MAR03283
Devlin-Moyer Dec 28, 2023
5eaebad
fix: remove MAR05356 for duplicating MAR03275+MAR03277+MAR03278+MAR03279
Devlin-Moyer Dec 28, 2023
228fa53
fix: remove MAR05191 for duplicating MAR03280+MAR03281+MAR03282+MAR03283
Devlin-Moyer Dec 28, 2023
557b5e2
fix: remove MAR05123 for duplicating MAR03284+MAR03285+MAR03286+MAR03287
Devlin-Moyer Dec 28, 2023
b4d2ac4
fix: remove MAR05075 for duplicating MAR03288
Devlin-Moyer Dec 28, 2023
de7acc8
fix: remove MAR05072 for duplicating MAR03290+MAR03292+MAR03293
Devlin-Moyer Dec 28, 2023
15ea8ba
fix: replaced MAM03274m with MAM00091m in MAR05360
Devlin-Moyer Dec 28, 2023
512df3c
fix: removed MAM03274m for duplicating MAM00091m
Devlin-Moyer Dec 28, 2023
8c404a0
fix: removed MAM03653m for duplicating MAM00072m
Devlin-Moyer Dec 28, 2023
b186b22
fix: removed MAM03221m for duplicating MAM00089m
Devlin-Moyer Dec 28, 2023
b16646e
fix: removed MAM03182m for duplicating MAM03009m
Devlin-Moyer Dec 28, 2023
adc489b
fix: removed MAM03978m for duplicating MAM01576m
Devlin-Moyer Dec 28, 2023
84505c8
fix: removed MAM03203m for duplicating MAM01575m
Devlin-Moyer Dec 28, 2023
79a9c66
fix: removed MAM02698m for duplicating MAM03021m
Devlin-Moyer Dec 28, 2023
db41d5f
fix: removed MAM03650m for duplicating MAM01577m
Devlin-Moyer Dec 28, 2023
1fb40a6
fix a small type in rxn ID
feiranl Dec 31, 2023
86ad0df
chore: merge in latest develop branch
Devlin-Moyer Jan 8, 2024
bfc65ea
Merge branch 'develop' into fix/dupe_linoleoyl_gamma_linolenoyl_beta_…
feiranl Apr 23, 2024
File filter

Filter by extension

Filter by extension
Conversations
Failed to load comments.
Loading
Jump to
Jump to file
Failed to load files.
Loading
Diff view
Diff view
8 changes: 8 additions & 0 deletions data/deprecatedIdentifiers/deprecatedMetabolites.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -2263,3 +2263,11 @@ mets metsNoComp metBiGGID metKEGGID metHMDBID metChEBIID metPubChemID metLipidMa
"MAM02158n" "MAM02158" "" "" "" "" "124985" "" "CE2011" "" "CE2011" "MNXM57006" "" "m02158n"
"MAM00678c" "MAM00678" "" "" "" "" "22833562" "" "CE2435" "" "dec24dicoa" "MNXM1601" "" "m00678c"
"MAM03035c" "MAM03035" "" "" "" "" "16019966" "" "CE5121" "" "dece3coa" "MNXM90096" "" "m03035c"
"MAM03274m" "MAM03274" "4hexdtricoa" "" "" "" "" "" "" "" "4hexdtricoa" "" "" "4hexdtricoa_m"
"MAM03653m" "MAM03653" "hexdectecoa" "" "" "" "" "" "" "" "hexdectecoa" "" "" "hexdectecoa_m"
"MAM03221m" "MAM03221" "3hexdtricoa" "" "" "" "" "" "" "" "3hexdtricoa" "" "" "3hexdtricoa_m"
"MAM03182m" "MAM03182" "2hexdtricoa" "" "" "" "" "" "" "" "2hexdtricoa" "" "" "2hexdtricoa_m"
"MAM03978m" "MAM03978" "tetdecdicoa" "" "" "" "21252281" "" "" "" "tetdecdicoa" "" "" "tetdecdicoa_m"
"MAM03203m" "MAM03203" "3ddecdicoa" "" "" "" "5280771" "" "" "" "3ddecdicoa" "" "" "3ddecdicoa_m"
"MAM02698m" "MAM02698" "2ddecdicoa" "" "" "" "5280770" "" "" "" "2ddecdicoa" "" "" "2ddecdicoa_m"
"MAM03650m" "MAM03650" "hexddcoa" "" "" "" "" "" "" "" "hexddcoa" "" "" "hexddcoa_m"
10 changes: 10 additions & 0 deletions data/deprecatedIdentifiers/deprecatedReactions.tsv
View file
Open in desktop
Original file line number Diff line number Diff line change
Expand Up @@ -282,3 +282,13 @@ rxns rxnKEGGID rxnBiGGID rxnEHMNID rxnHepatoNET1ID rxnREACTOMEID rxnRecon3DID rx
"MAR03322" "" "" "RE3627X" "" "" "HMR_3322" "MNXR124610" "HMR_3322" "RCR14521" "" 0 "" "" "HMR_3322"
"MAR03296" "" "" "RE3627M" "" "R-HSA-109343" "HMR_3296" "MNXR124610" "HMR_3296" "RCR12779" "" 0 "" "" "HMR_3296"
"MAR04005" "" "" "" "" "" "RE3627C" "" "" "" "" 0 "" "" "RE3627C"
"MAR05358" "" "FAOXC183C163Gm" "" "" "" "FAOXC183C163Gm" "" "" "" "" 0 "" "" "FAOXC183C163Gm"
"MAR05195" "" "FAOXC163C164Gm" "" "" "" "FAOXC163C164Gm;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC163C164Gm;HMR_3422;MAR03422"
"MAR05302" "" "FAOXC164GC163m" "" "" "" "FAOXC164GC163m;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC164GC163m;HMR_3422;MAR03422"
"MAR05229" "" "FAOXC163Gm" "" "" "" "FAOXC163Gm;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC163Gm;HMR_3422;MAR03422"
"MAR05208" "" "FAOXC163GC142m" "" "" "" "FAOXC163GC142m;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC163GC142m;HMR_3422;MAR03422"
"MAR05356" "" "FAOXC182C162m" "" "" "" "FAOXC182C162m" "" "" "" "" 0 "" "" "FAOXC182C162m"
"MAR05191" "" "FAOXC162C142m" "" "" "" "FAOXC162C142m" "" "" "" "" 0 "" "" "FAOXC162C142m"
"MAR05123" "" "FAOXC142C122m" "" "" "" "FAOXC142C122m;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC142C122m;HMR_3422;MAR03422"
"MAR05075" "" "FAOXC122m" "" "" "" "FAOXC122m;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC122m;HMR_3422;MAR03422"
"MAR05072" "" "FAOXC122C101m" "" "" "" "FAOXC122C101m;HMR_3422" "" "HMR_3422" "RCR12667" "" 0 "" "" "FAOXC122C101m;HMR_3422;MAR03422"
Loading