Natural Asset Smart Contract

GeoGraph provides a tool for analysing habitat fragmentation and related problems in landscape ecology. GeoGraph builds a geospatially referenced graph from land cover or field survey data and enab…

Massive Eco-Evolutionary Synthesis Simulations

Interact with your documents using the power of GPT, 100% privately, no data leaks

Retrieval Augmented Generation (RAG) chatbot powered by Weaviate

Access the diat.barcode database with R

Formattable Data Structures

This example project shows how to create a dynamic report.

Informatic Sequence Classification Trees

taxonomy R packages

Accurate sample inference from amplicon data with single nucleotide resolution

R package for Benthic Biotic Indices calculation from composition data

A robust and fast clustering method for amplicon-based studies

A web app for environmental DNA metabarcoding analysis

Learning Finite State Machine Models from Data with a Genetic Algorithm

Written by Emily Curd (eecurd@g.ucla.edu), Jesse Gomer (jessegomer@gmail.com), Gaurav Kandlikar (gkandlikar@ucla.edu), Zack Gold (zjgold@ucla.edu), Max Ogden (max@maxogden.com), Lenore Pipes (lpipe…

Progressive Approach for SNP Calling and Haplotype Assembly Using SMRT Data

Bioinformatics Workbook repository

MetaLIMS, A Simple Open-Source Laboratory Information Management System for Small Metagenomic Labs

JAMP - Just Another Metabarcoding Pipeline

phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. …

🌈 Interactive analysis of metagenomics data

High-performance error correction for Illumina resequencing data

TULIP - The Uncorrected Long read Itegration Pipeline

R mased batch sequence downloader, with primer development and in silico evaluation capabilities

OpenProject is the leading open source project management software.

R for data science: a book