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Make validate_visualization_df work without matplotlib installation #215

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Merged
dweindl merged 2 commits into from
Jul 17, 2023
Merged

Make validate_visualization_df work without matplotlib installation #215

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9635e21
Make validate_visualization_df work without matplotlib installation
dweindl Jul 17, 2023
597464e
Update petab/visualize/__init__.py
dweindl Jul 17, 2023
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34 changes: 21 additions & 13 deletions petab/visualize/__init__.py
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Original file line number Diff line number Diff line change
Expand Up @@ -6,24 +6,32 @@
``import petab.visualize``.

"""
import importlib.util

from .plot_data_and_simulation import (
plot_without_vis_spec,
plot_with_vis_spec,
plot_problem,
)
mpl_spec = importlib.util.find_spec("matplotlib")

from .plot_residuals import plot_goodness_of_fit, plot_residuals_vs_simulation
from .plotter import MPLPlotter
from .plotting import DataProvider, Figure

__all__ = [
"plot_without_vis_spec",
"plot_with_vis_spec",
"plot_problem",
"plot_goodness_of_fit",
"plot_residuals_vs_simulation",
"MPLPlotter",
"DataProvider",
"Figure"
]

if mpl_spec is not None:
from .plot_data_and_simulation import (
plot_without_vis_spec,
plot_with_vis_spec,
plot_problem,
)

from .plot_residuals import plot_goodness_of_fit, plot_residuals_vs_simulation
from .plotter import MPLPlotter

__all__.extend([
"plot_without_vis_spec",
"plot_with_vis_spec",
"plot_problem",
"plot_goodness_of_fit",
"plot_residuals_vs_simulation",
"MPLPlotter",
])