Simplify test model creation - use simplesbml #139
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Codecov Report
@@ Coverage Diff @@
## develop #139 +/- ##
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- Coverage 77.22% 76.75% -0.47%
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Files 27 27
Lines 2955 2956 +1
Branches 718 724 +6
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- Hits 2282 2269 -13
- Misses 489 507 +18
+ Partials 184 180 -4
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| sbml.add_global_parameter(model, 'parameter1') | ||
| sbml.add_global_parameter(model, 'noiseParameter1_') | ||
| sbml.add_global_parameter(model, 'observableParameter1_') | ||
| import simplesbml |
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Move to header? Currently imported multiple times.
Also imported within test cases in other files.
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The idea was not importing bulky libsbml everywhere, that when running non-sbml only, they will complete slightly faster (e.g., convenient when using auto-rerun).
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| # compartment missing in model | ||
| condition_df['c1'] = [4.0] | ||
| condition_df['c2'] = [4.0] |
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Compartment name changed? Is it that the default compartment in a simplesbml.SbmlModel is already 'c1'?
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