Handle upgrade with multiple installed same plugins

[ryanmelt]

closes #1125

[sonarqubecloud]

Quality Gate passed

Issues
0 New issues
0 Accepted issues

Measures
0 Security Hotspots
No data about Coverage
0.0% Duplication on New Code

See analysis details on SonarCloud

[codecov]

Codecov Report

Attention: Patch coverage is 8.33333% with 11 lines in your changes are missing coverage. Please review.

Project coverage is 75.02%. Comparing base (6b9e120) to head (c28fd75).

Files	Patch %	Lines
openc3/lib/openc3/utilities/process_manager.rb	0.00%	6 Missing ⚠️
openc3/lib/openc3/models/gem_model.rb	16.66%	5 Missing ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##             main    #1135      +/-   ##
==========================================
- Coverage   75.02%   75.02%   -0.01%     
==========================================
  Files         594      594              
  Lines       43826    43829       +3     
  Branches      757      757              
==========================================
  Hits        32881    32881              
- Misses      10862    10865       +3     
  Partials       83       83              

Flag	Coverage Δ
frontend	55.52% <ø> (+0.03%)	⬆️
python	83.01% <ø> (-0.02%)	⬇️
ruby-api	48.70% <ø> (ø)
ruby-backend	80.06% <8.33%> (-0.02%)	⬇️

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