Merge branch 'dev-pgd-hk' of github.com:Medical-Image-Analysis-Labora…

…tory/mialsuperresolutiontoolkit into dev-pgd-hk
Medical-Image-Analysis-Laboratory · Oct 30, 2020 · 0a0da2f · 0a0da2f
2 parents 7001fa7 + e6433c6
commit 0a0da2f
Showing 1 changed file with 0 additions and 2 deletions.
diff --git a/src/BrainLocalizationExtraction/brainExtractionTwoSteps.py b/src/BrainLocalizationExtraction/brainExtractionTwoSteps.py
@@ -51,8 +51,6 @@ def extractBrain(dataPath, modelCkptLoc, thresholdLoc,modelCkptSeg,thresholdSeg,
         if normalize:
             if normalize == "local_max":
                  images[slice_counter, :, :, 0] = img_patch / np.max(img_patch)
-            elif normalize == "global_max":
-                 images[slice_counter, :, :, 0] = img_patch / max_val
             elif normalize ==  "mean_std":
                  images[slice_counter, :, :, 0] = (img_patch-np.mean(img_patch))/np.std(img_patch)
             else: