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New Mesh: WC14to60kmL60E3SMv2r02 #584

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Merged
merged 14 commits into from
Jun 5, 2020
Merged

New Mesh: WC14to60kmL60E3SMv2r02 #584

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01abf5a
Add WC14 case to compass
mark-petersen Jun 1, 2020
cdb7ebf
Update mesh info in ini file
mark-petersen Jun 2, 2020
d9e329f
Fix periodicity of Bering Sea region
xylar Jun 2, 2020
949139c
Fix periodicity of Bering Sea region
xylar Jun 2, 2020
929a087
Move high-res region south around Norway
xylar Jun 4, 2020
a21c640
Extend Gulf Stream region further northeast
xylar Jun 4, 2020
fad1ce2
Update mesh metadata
xylar Jun 4, 2020
ce2811e
Shift Kamchatka region by 360 degrees
xylar Jun 4, 2020
f8f54fb
Name Bering sea halves
xylar Jun 4, 2020
0fc2245
Turn off land making at Kamchatka
xylar Jun 4, 2020
c556939
Update metadata
xylar Jun 4, 2020
9d0dc61
Change resolution around Kamchatka Peninsula
xylar Jun 4, 2020
1e9c443
Make the resolution plot 300 dpi for easier zooming
xylar Jun 4, 2020
c2ad8bf
Removes timeMonthlyOutput from spinup of WC14
vanroekel Jun 5, 2020
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14 changes: 7 additions & 7 deletions testing_and_setup/compass/ocean/global_ocean/CUSP12/init/region_Bering_Sea.geojson
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Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@
"name": "region for CUSP mesh",
"component": "ocean",
"object": "region",
"author": "Mark Petersen"
"author": "Mark Petersen, Xylar Asay-Davis"
},
"geometry": {
"type": "Polygon",
Expand All @@ -26,12 +26,12 @@
47.81315451752768
],
[
187.91015625,
70.78690984117928
180.0,
51.12421275782688
],
[
182.724609375,
70.90226826757711
180.0,
70.58341752317065
],
[
167.2119140625,
Expand Down Expand Up @@ -74,11 +74,11 @@
71.27259471233448
],
[
-179.99999,
-180.0,
70.58341752317065
],
[
-179.99999,
-180.0,
51.12421275782688
],
[
Expand Down
253 changes: 253 additions & 0 deletions testing_and_setup/compass/ocean/global_ocean/WC14/init/coastline_CUSP.geojson
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Original file line number Diff line number Diff line change
@@ -0,0 +1,253 @@
{
"type": "FeatureCollection",
"features": [
{
"type": "Feature",
"properties": {
"name": "region for CUSP mesh",
"component": "ocean",
"object": "region",
"author": "Mark Petersen"
},
"geometry": {
"type": "Polygon",
"coordinates": [
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],
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],
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],
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],
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],
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],
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],
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}
]
}
74 changes: 74 additions & 0 deletions testing_and_setup/compass/ocean/global_ocean/WC14/init/config_E3SM_coupling_files.ini
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# This is the custom config file specific to this test case. Any values here
# will override the defaults in defaults.ini Users wishing to alter the
# configuration should modify this file, rather than defaults.ini

[main]
nprocs = 1
# the file name of the initial condition, possibly after spin-up
initial_condition = ../../spin_up/simulation/restarts/restart.0001-01-21_00.00.00.nc

[mesh]
short_name = ${prefix}${min_res}to${max_res}E${e3sm_version}r${mesh_version}
long_name = ${prefix}${min_res}to${max_res}kmL${levels}E3SMv${e3sm_version}r${mesh_version}
prefix = WC
description = MPAS North America and Arctic Focused Water Cycle mesh for E3SM version
${e3sm_version}, with a focused ${min_res}-km resolution
around North America and ${levels} vertical levels as documented at
https://github.com/MPAS-Dev/MPAS-Model/pull/584
e3sm_version = 2
mesh_version = 02
creation_date = autodetect
min_res = 14
max_res = 60
max_depth = autodetect
levels = autodetect
runoff_description = <<<Spreading function described here>>>

# The following options are detected from .gitconfig if not explicitly entered
author = autodetect
email = autodetect

[initial_condition_ocean]
enable = true

[graph_partition_ocean]
enable = true

[initial_condition_seaice]
enable = true

[scrip]
enable = true

[transects_and_regions]
enable = true

[mapping_analysis]
enable = true

[mapping_CORE_Gcase]
enable = false

[mapping_JRA_Gcase]
enable = false

[mapping_ne30]
enable = false

[domain_CORE_Gcase]
enable = false

[domain_JRA_Gcase]
enable = false

[domain_ne30]
enable = false

[mapping_runoff]
enable = false

[salinity_restoring]
enable = false

[prescribed_ismf]
enable = false
26 changes: 26 additions & 0 deletions testing_and_setup/compass/ocean/global_ocean/WC14/init/config_base_mesh.xml
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@@ -0,0 +1,26 @@
<?xml version="1.0"?>
<config case="base_mesh">
<get_file dest_path="bathymetry_database" file_name="SRTM15_plus_earth_relief_15s.nc">
<mirror protocol="wget" url="https://web.lcrc.anl.gov/public/e3sm/mpas_standalonedata/mpas-ocean/bathymetry_database/"/>
</get_file>

<add_link source_path="mpas_model" source="testing_and_setup/compass/ocean/jigsaw_to_MPAS" dest="jigsaw_to_MPAS"/>
<add_link source_path="bathymetry_database" source="SRTM15_plus_earth_relief_15s.nc" dest="earth_relief_15s.nc"/>
<copy_file source_path="script_test_dir" source="define_base_mesh.py" dest="define_base_mesh.py"/>
<add_link source_path="script_test_dir" source="coastline_CUSP.geojson" dest="coastline_CUSP.geojson"/>
<add_link source_path="script_test_dir" source="land_mask_Mexico.geojson" dest="land_mask_Mexico.geojson"/>
<add_link source_path="script_test_dir" source="region_Bering_Sea.geojson" dest="region_Bering_Sea.geojson"/>
<add_link source_path="script_test_dir" source="region_Bering_Sea_reduced.geojson" dest="region_Bering_Sea_reduced.geojson"/>
<add_link source_path="script_test_dir" source="region_Gulf_Stream_extension.geojson" dest="region_Gulf_Stream_extension.geojson"/>
<add_link source_path="script_test_dir" source="land_mask_Kamchatka.geojson" dest="land_mask_Kamchatka.geojson"/>
<add_link source_path="script_test_dir" source="region_Arctic_Ocean.geojson" dest="region_Arctic_Ocean.geojson"/>
<add_link source_path="script_test_dir" source="region_Gulf_of_Mexico.geojson" dest="region_Gulf_of_Mexico.geojson"/>
<add_link source_path="script_test_dir" source="region_Central_America.geojson" dest="region_Central_America.geojson"/>

<run_script name="run.py">
<step executable="python">
<argument flag="-m">jigsaw_to_MPAS.build_mesh</argument>
</step>
</run_script>

</config>
1 change: 1 addition & 0 deletions testing_and_setup/compass/ocean/global_ocean/WC14/init/config_culled_mesh.xml
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../../config_files/config_culled_mesh.xml
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