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use JBrowse BlobFilehandleWrapper (fixes controlled access BAM) #102

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merged 2 commits into from
Sep 10, 2020

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GFJHogue
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Main issue: #101

['Showing 1 to 20 of 120,896', 'chr2:g.208248388C>T', 'chr17:g.7673803G>A']
['Showing 1 to 20 of 3,127', 'TCGA-A5-A1OF', 'TCGA-AJ-A3EK'],
['Showing 1 to 20 of 21,316', 'TTN', 'TP53'],
['Showing 1 to 20 of 132,784', 'chr7:g.140753336A>T', 'chr2:g.208248388C>T']
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Opened #103 to avoid stuff like this in the future

['Showing 1 to 20 of 5,952', 'chr7:g.140753336A>T', 'chr2:g.208248388C>T']
['Showing 1 to 20 of 457', 'TCGA-A5-A1OF', 'TCGA-AJ-A3EK'],
['Showing 1 to 20 of 575', 'TP53', 'BRAF'],
['Showing 1 to 20 of 6,580', 'chr7:g.140753336A>T', 'chr2:g.208248388C>T']
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same as above comment

@GFJHogue GFJHogue merged commit c47116b into develop Sep 10, 2020
@GFJHogue GFJHogue deleted the feature/101/use-jbrowse-blobfilehandlewrapper branch September 10, 2020 18:08
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Successfully merging this pull request may close these issues.

Controlled access BAM not working; BlobFilehandleWrapper copy not needed & contains buggy typo
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