This repository contains Supporting Material to accompany Chapter 3 of my PhD Thesis submitted to the University of Bristol
Below, you'll find a brief description of directories in this repository
- Python code for manipulation of coral volumes and extraction of aligned µCT slices via Avizo's Python API
- Python code for virtual slab processing
- R code used to produce figures
This directory contains:
- Published tables with extracted data and sclerochronology analyses
- Download links to full-resolution coral X-ray µCT slab images here.
- Region Of Interest Files compatible with Fiji and containing manual tracings on virtual coral slabs. A single ROI.zip file can be superimposed onto its corresponding virtual slab for visualisation of tracings using Fiji. The results of extracted measurements on slabs are in ROI_extraction_results.xlsx