Specifies correct extensions for various file formats #176
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heuermh
approved these changes
Dec 18, 2017
tomwhite
reviewed
Dec 18, 2017
| boolean isCompressed = getCompressOutput(ctx); | ||
| CompressionCodec codec = null; | ||
| String extension = ""; | ||
| String extension = ".vcf"; |
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Won't this get replaced by the compressor extension in the next code block anyway? So it will be "file.bgz" not "file.vcf.bgz".
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@tomwhite SGTM! We can override the behavior downstream in ADAM, so don't hold up 7.9.1 for this patch. |
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Resolves #175. Would love to take this in the 7.9.1 release if possible.