Biomatters Open Source

Enter a list of unique IDs (URNs) for documents in your Geneious database to select them. Useful if you would like to store a reference to Geneious documents in another program. This works with documents stored in a Shared Database and the IDs do not change when documents are moved between folders or edited.

Compare your sequence to a database of known parallel two-stranded coiled-coils and derive a similarity score. By comparing this score to the distribution of scores in globular and coiled-coil proteins, you can then calculate the probability that the sequence will adopt a coiled-coil conformation.

This plugin adds two operations to Geneious, one to reverse a DNA sequence (without complementing) and one to complement a DNA sequence (without reversing)

Python 3 version of https://github.com/MicrosoftResearch/Azimuth for use by Geneious Prime

Provides services to search for genes in all of the EuPathDB databases. EuPathDB (formerly ApiDB) is an integrated database covering the eukaryotic pathogens in many genera.

The Species Delimitation Plugin an exploratory tool that allows you to assess putative species in phylogenetic trees. The plugin summarises measures of phylogenetic support and diagnosability of species defined as user-selected collections of taxa on user-supplied trees. Plugin by Brad Masters, Vicky Fan and Howard Ross.