Skip to content

Actions: BimberLab/nimble-aligner

Actions

Run Tests

Actions

Loading...
Loading

Show workflow options

Create status badge

Loading
ci.yml
32 workflow runs
32 workflow runs

Filter by Event

Filter by Status

Filter by Branch

Filter by Actor

Add sanity checking for aligner config floats Run Tests #138: Commit fdeab1c pushed by hextraza
October 28, 2024 23:15 2m 56s main
main
October 28, 2024 23:15 2m 56s
Add manual mismatch filter Run Tests #137: Commit 2f8bac1 pushed by hextraza
August 6, 2024 22:32 2m 53s main
main
August 6, 2024 22:32 2m 53s
Reenable trimming Run Tests #136: Commit 9a25d8e pushed by hextraza
July 21, 2024 17:38 2m 45s main
main
July 21, 2024 17:38 2m 45s
Reverse dna read buffer for correct r1/r2 order post-sorting Run Tests #135: Commit fba58ec pushed by hextraza
July 19, 2024 20:44 2m 48s main
main
July 19, 2024 20:44 2m 48s
Disable trimming Run Tests #134: Commit 4682bee pushed by hextraza
July 16, 2024 21:46 2m 48s main
main
July 16, 2024 21:46 2m 48s
Fix qual string length to match TSO trim Run Tests #133: Commit 5ec06db pushed by hextraza
July 16, 2024 03:34 2m 50s main
main
July 16, 2024 03:34 2m 50s
Add MAXINFO read trimming implementation Run Tests #132: Commit 768d64b pushed by hextraza
July 16, 2024 02:31 2m 58s main
main
July 16, 2024 02:31 2m 58s
Refactor (#82) Run Tests #131: Commit 5fb67f1 pushed by hextraza
June 6, 2024 18:51 2m 48s main
main
June 6, 2024 18:51 2m 48s
Add raw nimble scores and triage reasoning to output Run Tests #130: Commit d855f38 pushed by hextraza
March 19, 2024 16:48 3m 16s main
main
March 19, 2024 16:48 3m 16s
Skip SEQ when writing out Run Tests #129: Commit 936c359 pushed by hextraza
February 16, 2024 00:54 2m 51s main
main
February 16, 2024 00:54 2m 51s
Log and propagate orientation filter reasoning to output Run Tests #128: Commit 959c8b6 pushed by hextraza
February 16, 2024 00:45 2m 54s main
main
February 16, 2024 00:45 2m 54s
Output whole UMI if a score is recovered Run Tests #127: Commit bcc65c6 pushed by hextraza
February 15, 2024 18:21 2m 55s main
main
February 15, 2024 18:21 2m 55s
Add arbitrary BAM field and tag dumping to output, gzip results Run Tests #126: Commit 5bc7c4e pushed by hextraza
February 15, 2024 00:43 2m 53s main
main
February 15, 2024 00:43 2m 53s
Run Tests Run Tests #125: by hextraza
February 2, 2024 19:43 2m 46s main
main
February 2, 2024 19:43 2m 46s
Update sorted_bam_reader.rs Run Tests #124: Commit d9ebca5 pushed by hextraza
February 1, 2024 00:02 2m 51s main
main
February 1, 2024 00:02 2m 51s
Update sorted_bam_reader.rs Run Tests #123: Commit 23ff8d2 pushed by hextraza
January 31, 2024 21:33 2m 54s main
main
January 31, 2024 21:33 2m 54s
Merge pull request #81 from BimberLab/hextraza-patch-1 Run Tests #122: Commit 4374aa4 pushed by hextraza
January 30, 2024 21:50 2m 48s main
main
January 30, 2024 21:50 2m 48s
Skip first run of non-matching reads from sorted bam Run Tests #121: Commit 81865dc pushed by hextraza
January 30, 2024 21:17 2m 44s main
main
January 30, 2024 21:17 2m 44s
Switch to jemallocator Run Tests #120: Commit 1451a39 pushed by hextraza
January 20, 2024 01:20 2m 39s main
main
January 20, 2024 01:20 2m 39s
Fix memory leak related to thread orchestration Run Tests #119: Commit 6a5ea43 pushed by hextraza
January 18, 2024 21:03 2m 22s main
main
January 18, 2024 21:03 2m 22s
Reduce total UMIs in pool Run Tests #118: Commit d9161f9 pushed by hextraza
January 17, 2024 23:44 2m 9s main
main
January 17, 2024 23:44 2m 9s
Properly handle num_consumers for memory headroom calculation Run Tests #117: Commit 5c53f23 pushed by hextraza
December 16, 2023 02:16 2m 21s main
main
December 16, 2023 02:16 2m 21s
Don't include the current thread when doing ram waiting calculations Run Tests #116: Commit cf9ad7e pushed by hextraza
December 16, 2023 02:06 2m 10s main
main
December 16, 2023 02:06 2m 10s
Remove feature declaration for nightly features Run Tests #115: Commit 15d56d0 pushed by hextraza
December 14, 2023 22:45 2m 17s main
main
December 14, 2023 22:45 2m 17s
Remove nightly-only custom allocator hook Run Tests #114: Commit 9b2b2d4 pushed by hextraza
December 14, 2023 22:29 2m 12s main
main
December 14, 2023 22:29 2m 12s