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@BimberLab

Bimber Lab

Software created by the Bimber Lab of OHSU

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  1. DISCVRSeq DISCVRSeq Public

    A collection of command line tools for working with sequencing data

    HTML 50 16

  2. DiscvrLabKeyModules DiscvrLabKeyModules Public

    A collection of public LabKey modules developed by the Bimber Lab

    HTML 4 4

  3. cellhashR cellhashR Public

    An R package designed to demultiplex cell hashing data

    R 27 6

  4. geneSetVis geneSetVis Public

    gene-set enrichment visualization.

    R 1 1

Repositories

Showing 10 of 12 repositories
  • DiscvrLabKeyModules Public

    A collection of public LabKey modules developed by the Bimber Lab

    BimberLab/DiscvrLabKeyModules’s past year of commit activity
    HTML 4 4 12 3 Updated Nov 5, 2024
  • nimble Public

    nimble — execute lightweight, flexible alignments on arbitrary reference libraries

    BimberLab/nimble’s past year of commit activity
    Python 1 MIT 0 7 2 Updated Nov 5, 2024
  • DISCVRSeq Public

    A collection of command line tools for working with sequencing data

    BimberLab/DISCVRSeq’s past year of commit activity
    HTML 50 Apache-2.0 16 1 0 Updated Nov 2, 2024
  • cellhashR Public

    An R package designed to demultiplex cell hashing data

    BimberLab/cellhashR’s past year of commit activity
    R 27 6 1 0 Updated Oct 30, 2024
  • nimble-aligner Public

    nimble-aligner is the backend for nimble, a tool that executes lightweight, flexible alignments to generate supplemental alignment data

    BimberLab/nimble-aligner’s past year of commit activity
    Rust 1 MIT 1 3 0 Updated Oct 28, 2024
  • discvr-components Public

    This holds npm packages designed to support DISCVR web applications

    BimberLab/discvr-components’s past year of commit activity
    JavaScript 0 Apache-2.0 0 6 1 Updated Oct 16, 2024
  • RIRA Public

    Code for utility of RIRA for classification of cell types/phenotypes

    BimberLab/RIRA’s past year of commit activity
    R 4 2 0 0 Updated Oct 13, 2024
  • testAutomation Public Forked from LabKey/testAutomation

    LabKey Server testing infrastructure and helpers

    BimberLab/testAutomation’s past year of commit activity
    Java 0 9 0 0 Updated Dec 22, 2022
  • geneSetVis Public

    gene-set enrichment visualization.

    BimberLab/geneSetVis’s past year of commit activity
    R 1 1 0 0 Updated Feb 11, 2022
  • BimberLab.github.io Public

    Bimber Lab Site

    BimberLab/BimberLab.github.io’s past year of commit activity
    1 Apache-2.0 1 0 0 Updated Jan 7, 2021
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