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Add pipeline suffix logging to n5tozarr and zarrmscale outputs.
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kgabor committed Feb 5, 2024
1 parent 3dbe790 commit 922f73b
Showing 1 changed file with 2 additions and 0 deletions.
2 changes: 2 additions & 0 deletions src/aind_exaspim_pipeline_utils/n5tozarr/n5tozarr_da.py
Original file line number Diff line number Diff line change
Expand Up @@ -325,6 +325,7 @@ def n5tozarr_da_converter(): # pragma: no cover
LOGGER.setLevel(logging.INFO)

capsule_manifest = exaspim_manifest.get_capsule_manifest()
LOGGER.info("This is pipeline run: %s", capsule_manifest.pipeline_suffix)
config = capsule_manifest.n5_to_zarr.dict()
if config is None:
raise ValueError("Manifest does not contain configuration for n5tozarr processing")
Expand Down Expand Up @@ -439,6 +440,7 @@ def zarr_multiscale_converter(): # pragma: no cover
LOGGER.setLevel(logging.INFO)

capsule_manifest = exaspim_manifest.get_capsule_manifest()
LOGGER.info("This is pipeline run: %s", capsule_manifest.pipeline_suffix)
config = capsule_manifest.zarr_multiscale.dict()
if config is None:
raise ValueError("Manifest does not contain configuration for zarr_multiscale processing")
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