Allen Institute for Neural Dynamics
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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openscope-community-predictive-processing
openscope-community-predictive-processing PublicThis repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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ibl-ephys-alignment-gui
ibl-ephys-alignment-gui PublicForked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
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segmentation-skeleton-metrics
segmentation-skeleton-metrics PublicA Python package for evaluating the topological accuracy of a neuron segmentation by computing skeleton-based metrics.
Python 8
Repositories
- harp.device.quad-dac Public
0364: This repository contains the hardware, firmware, and software related to the Harp quad DAC
AllenNeuralDynamics/harp.device.quad-dac’s past year of commit activity - aind-data-transfer-service Public
FastAPI service to run data compression and transfer jobs on the hpc
AllenNeuralDynamics/aind-data-transfer-service’s past year of commit activity - aind-analysis-wrapper-df-model-fitting Public Forked from AllenNeuralDynamics/aind-analysis-wrapper
analysis wrapper for dynamic foraging model fitting
AllenNeuralDynamics/aind-analysis-wrapper-df-model-fitting’s past year of commit activity - aind-dynamic-foraging-data-utils Public
Tools for the analysis of behavior and neural data from the dynamic foraging task
AllenNeuralDynamics/aind-dynamic-foraging-data-utils’s past year of commit activity - lamf-analysis Public
Place for scientists & engineers on ophys-mFish projects (Learning mFISH, omFISH) to put ophys data processing development code, especially as a place to ease transition from LIMS to Codeocean
AllenNeuralDynamics/lamf-analysis’s past year of commit activity
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