Allen Institute for Neural Dynamics
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aind-data-schema
aind-data-schema PublicA library that defines AIND data schema and validates JSON.
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aind-ephys-pipeline
aind-ephys-pipeline PublicAIND pipeline for processing extracellular electrophysiology data
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openscope-community-predictive-processing
openscope-community-predictive-processing PublicThis repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Processing Community project.
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aind-ephys-spikesort-kilosort25-full
aind-ephys-spikesort-kilosort25-full PublicCodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
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segmentation-skeleton-metrics
segmentation-skeleton-metrics PublicA Python package for evaluating the topological accuracy of a neuron segmentation by computing skeleton-based metrics.
Python 8
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ibl-ephys-alignment-gui
ibl-ephys-alignment-gui PublicForked from int-brain-lab/iblapps
Tool for aligning electrophysiological features to anatomical landmarks
Repositories
- aind-pavlovian-data-utils Public Forked from AllenNeuralDynamics/aind-dynamic-foraging-data-utils
Tools for the analysis of behavior and neural data from the Pavlovian task
AllenNeuralDynamics/aind-pavlovian-data-utils’s past year of commit activity - aind-dft-ephys-analysis Public
shared library for dynamic foraging task (DFT) - neuropixels analysis
AllenNeuralDynamics/aind-dft-ephys-analysis’s past year of commit activity - HSFPpreprocess Public
AllenNeuralDynamics/HSFPpreprocess’s past year of commit activity - aind-exaspim-neuron-segmentation Public
A Python package for performing neuron segmentation in large-scale image datasets.
AllenNeuralDynamics/aind-exaspim-neuron-segmentation’s past year of commit activity