Skip to content
View AlexPersa7's full-sized avatar
3 followers · 30 following
  • Scientific Research Center of Jalisco, CIATEJ
  • Camino Arenero 1227, El Bajío, 45019 Zapopan, Jal.

Block or report AlexPersa7

Block user

Prevent this user from interacting with your repositories and sending you notifications. Learn more about blocking users.

You must be logged in to block users.

Please don't include any personal information such as legal names or email addresses. Maximum 100 characters, markdown supported. This note will be visible to only you.
Report abuse

Contact GitHub support about this user’s behavior. Learn more about reporting abuse.

Report abuse

  • genome-mining Public

    Forked from carpentries-incubator/genome-mining

    Genome Mining in Prokaryotes

    Python Other Updated Aug 21, 2024

  • GALA Public

    Forked from ganlab/GALA

    Long-reads Gap-free Chromosome-scale Assembler

    Python MIT License Updated Mar 21, 2023

  • pkgMetagenomica Public

    What the Package Does (One Line, Title Case)

    R Updated Aug 4, 2022

  • mi_libro Public

    Updated Aug 1, 2022

  • mi_presentacion Public

    bookdown edmo & xaringan

    JavaScript Updated Aug 1, 2022

  • cdsb_test Public

    test de repo

    Updated Aug 1, 2022

  • repo_cdsb2022 Public

    Esto es una descripción de prueba

    Updated Aug 1, 2022

  • GENESPACE Public

    Forked from jtlovell/GENESPACE
    R Other Updated Mar 14, 2022

  • plotsr Public

    Forked from schneebergerlab/plotsr

    Tool to plot synteny and structural rearrangements between genomes

    Python MIT License Updated Jan 27, 2022

  • freebayes Public

    Forked from freebayes/freebayes

    Bayesian haplotype-based genetic polymorphism discovery and genotyping.

    C++ MIT License Updated Jan 22, 2022

  • project_v2 Public

    proyecto git_win

    R Updated Nov 25, 2021

  • lotus2 Public

    Forked from hildebra/lotus2

    Amplicon sequencing pipelines suitable for 16S, 18S and ITS.

    C++ GNU General Public License v3.0 Updated Sep 1, 2021

  • AlexPersa7.github.io Public

    Updated Aug 15, 2021

  • scRNA-Seq_notas_curso Public

    R Updated Aug 9, 2021

  • NextDenovo Public

    Forked from Nextomics/NextDenovo

    Fast and accurate de novo assembler for long reads

    GNU General Public License v3.0 Updated Aug 9, 2021

  • TBtools Public

    Forked from CJ-Chen/TBtools-II

    GUI/CommandLine Tool Box for biologistists to utilize NGS data.

    Shell Updated Apr 14, 2021

  • ARMOR Public

    Forked from csoneson/ARMOR

    Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data

    R MIT License Updated Mar 15, 2021

  • hal Public

    Forked from ComparativeGenomicsToolkit/hal

    Hierarchical Alignment Format

    C++ Other Updated Mar 11, 2021

  • MMseqs2 Public

    Forked from soedinglab/MMseqs2

    MMseqs2: ultra fast and sensitive search and clustering suite

    C++ 1 GNU General Public License v3.0 Updated Mar 10, 2021

  • seqtk Public

    Forked from lh3/seqtk

    Toolkit for processing sequences in FASTA/Q formats

    C MIT License Updated Feb 23, 2021

  • Liftoff Public

    Forked from agshumate/Liftoff

    An accurate GFF3/GTF lift over pipeline

    Python GNU General Public License v3.0 Updated Feb 12, 2021

  • gggenomes Public

    Forked from thackl/gggenomes

    A grammar of graphics for comparative genomics

    R MIT License Updated Feb 11, 2021

  • megalodon Public

    Forked from nanoporetech/megalodon

    Megalodon is a research command line tool to extract high accuracy modified base and sequence variant calls from raw nanopore reads by anchoring the information rich basecalling neural network out…

    Python Other Updated Feb 5, 2021

  • shi7 Public

    Forked from knights-lab/shi7

    Auto-parameterizing QC Pipeline for Illumina sequencing runs

    Python GNU Affero General Public License v3.0 Updated Dec 31, 2020

  • RagTag Public

    Forked from malonge/RagTag

    Fast reference-guided genome assembly scaffolding

    Python MIT License Updated Nov 27, 2020

  • RaGOO Public

    Forked from malonge/RaGOO

    Fast Reference-Guided Scaffolding of Genome Assembly Contigs. RagTag, the successor to RaGOO, is now available here: https://github.com/malonge/RagTag

    Python MIT License Updated Nov 20, 2020

  • scripting_linux_shell Public

    Forked from eead-csic-compbio/scripting_linux_shell

    A collection of recipes to start scripting in the linux command line

    Perl GNU General Public License v3.0 Updated Oct 21, 2020

  • CheckM Public

    Forked from Ecogenomics/CheckM

    Assess the quality of microbial genomes recovered from isolates, single cells, and metagenomes

    Python GNU General Public License v3.0 Updated Aug 10, 2020

  • make_SILVA_db Public

    Forked from mikerobeson/make_SILVA_db

    General procedure for making QIIME 2 compatible SILVA reference files

    Python BSD 3-Clause "New" or "Revised" License Updated Jun 13, 2020

  • medaka Public

    Forked from nanoporetech/medaka

    Sequence correction provided by ONT Research

    Python Other Updated May 6, 2020