Prediction of repeated-dose intravenous ketamine response in major depressive disorder by using the GWAS-based machine learning approach
step1_split_dataset.py
: Randomly divide the initial dataset into six folds.step2_feature_selection.py
: Calculate random forest importance score based on GWAS result.step3_model_construction.py
: Model construction.plink.sh
: Conduct quality control and genome-wide logistic regression in PLINK v.1.9 and encode the the genotype data as 0, 1 or 2.models.zip
: The models conducted in this study (pickle files).