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WHAMG call more DUPs in several samples compared to other software

Status: Open.

#67 In zeeev/wham;

· Linaria219 opened on Apr 1, 2025

WHAMG analysis runs with Illumina DRAGEN 3.7.6 cram output producing empty VCF files

Status: Open.

#66 In zeeev/wham;

· Solyris83 opened on Jan 7, 2025

long time on "INFO: Gathering graphs from forest." before getting the run killed.

Status: Open.

#65 In zeeev/wham;

· chuddy-ibk opened on Dec 11, 2024

HG002 results suspiciously bad

Status: Open.

#64 In zeeev/wham;

· jdidion opened on Jul 25, 2024

[Question] Is Linux ARM64 supported ?

Status: Open.

#60 In zeeev/wham;

· gancho-ivanov opened on Jul 18, 2022

Meaning of AT Parameters?

Status: Open.

#59 In zeeev/wham;

· GWheelerEB opened on Sep 7, 2021

Output vcf file: ALT is not sequence

Status: Open.

#58 In zeeev/wham;

· quentin0515 opened on Mar 9, 2021

Wham installation fails

Status: Open.

#56 In zeeev/wham;

· cccnrc opened on Sep 1, 2020

error: INFO: processed 0 reads for BAM file

Status: Open.

#55 In zeeev/wham;

· cccnrc opened on Sep 1, 2020

installation fails

Status: Open.

#54 In zeeev/wham;

· masen1991 opened on Jan 11, 2020

Workflow for large number of genomes (Population)

question

Status: Open.

#52 In zeeev/wham;

· djakubosky opened on Sep 26, 2019

Stochastic output

question

Status: Open.

#51 In zeeev/wham;

· mwalker174 opened on Sep 24, 2019