replace pip install -U matplotlib sympy jupyter scipy nrpylatex insta…

…ll [blah] with %pip install [blah], per iPython's suggestion.
zachetienne · Sep 8, 2022 · 5c87510 · 5c87510
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diff --git a/Tutorial-ADM_Initial_Data-ScalarField.ipynb b/Tutorial-ADM_Initial_Data-ScalarField.ipynb
@@ -598,7 +598,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy >/dev/null"
+    "%pip install scipy >/dev/null"
    ]
   },
   {

diff --git a/Tutorial-Finite_Difference_Derivatives-FDtable_soln.ipynb b/Tutorial-Finite_Difference_Derivatives-FDtable_soln.ipynb
@@ -63,7 +63,7 @@
    ],
    "source": [
     "print(\"Installing astropy, needed for creating the output table. Please wait a few seconds...\")\n",
-    "!pip install -U pip astropy > /dev/null\n",
+    "%pip install -U pip astropy > /dev/null\n",
     "print(\"astropy installed.\")\n",
     "# Step 0: Import needed modules\n",
     "import numpy as np\n",

diff --git a/Tutorial-LaTeX_Interface_Example-BSSN_Cartesian.ipynb b/Tutorial-LaTeX_Interface_Example-BSSN_Cartesian.ipynb
@@ -77,8 +77,8 @@
     }
    ],
    "source": [
-    "!pip install nrpylatex==1.0.8 > /dev/null\n",
-    "!pip freeze | grep nrpylatex\n",
+    "%pip install nrpylatex==1.0.8 > /dev/null\n",
+    "%pip freeze | grep nrpylatex\n",
     "%load_ext nrpylatex.extension"
    ]
   },

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Neutron_Star-Hydro_without_Hydro.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Neutron_Star-Hydro_without_Hydro.ipynb
@@ -255,7 +255,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null"
+    "%pip install scipy > /dev/null"
    ]
   },
   {
@@ -1534,7 +1534,7 @@
    ],
    "source": [
     "print(\"Ignore any warnings or errors from the following command:\")\n",
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-ScalarField_Collapse.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-ScalarField_Collapse.ipynb
@@ -257,7 +257,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy numpy > /dev/null"
+    "%pip install scipy numpy > /dev/null"
    ]
   },
   {
@@ -1352,7 +1352,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_Exact_Initial_Data.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_Exact_Initial_Data.ipynb
@@ -952,7 +952,7 @@
    ],
    "source": [
     "# First install scipy if it's not yet installed. This will have no effect if it's already installed.\n",
-    "!pip install scipy"
+    "%pip install scipy"
    ]
   },
   {

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_ScalarField_initial_data.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_ScalarField_initial_data.ipynb
@@ -188,7 +188,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null"
+    "%pip install scipy > /dev/null"
    ]
   },
   {

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_TOV_initial_data.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Setting_up_TOV_initial_data.ipynb
@@ -221,7 +221,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null"
+    "%pip install scipy > /dev/null"
    ]
   },
   {

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide-Psi4_new_way.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide-Psi4_new_way.ipynb
@@ -1112,7 +1112,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide-no_rfm_precompute.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide-no_rfm_precompute.ipynb
@@ -1325,7 +1325,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide.ipynb
@@ -1324,7 +1324,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",

diff --git a/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide_new_way.ipynb b/Tutorial-Start_to_Finish-BSSNCurvilinear-Two_BHs_Collide_new_way.ipynb
@@ -1020,7 +1020,7 @@
    },
    "outputs": [],
    "source": [
-    "!pip install scipy > /dev/null\n",
+    "%pip install scipy > /dev/null\n",
     "\n",
     "check_for_ffmpeg = !which ffmpeg >/dev/null && echo $?\n",
     "if check_for_ffmpeg != ['0']:\n",