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v0.6.0
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@ytakemon ytakemon released this 04 Apr 23:30
· 87 commits to main since this release
v0.6.0
5691082
  • Version 0.5.0 was submitted to Bioinformatics and version 0.6.0 addresses several reviewer comments (detailed below).
  • GRETTA is now GRETTA (with two T's) due conflict with existing package on CRAN.
  • Upon loading GRETTA into R, a welcome message is displayed to indicate package version and the latest DepMap data set that is available.
  • Function arguments are now all lower case.
  • GI_screen() has a new argument gene_list = to allow small-scale GI screens and reduce computational time.
  • Default pan-cancer coessential_map() now uses pre-computed cor matrix to reduce computational time. This matrix is provided along with the DepMap data.
  • A vignette is now available and in a Bioconductor format to prepare for submission (same as readme).
  • Examples are now mostly run-able to comply with Bioconductor.
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