SCMDUtils

fork version of CalMolph maintained by Chang

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How to build?

cd $PROJECT_PATH
make

How to use?

cd $PROJECT_PATH
java -jar ./target/CalMolph-2.0.3.jar -i ./test/zzz -o ./test/out -x ./test/xml -v

parameters

name	description
i	input photo directory
o	output directory of the analysis results
x	output directory of the point coordinates
n	specify the strain name
s	specify the suffix of image file
a	actin mode, opt: [true / false], default true
d	DAPI mode, opt: [true / false], default true

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Update

• change ant build to maven
• fix SJIS encoding to UTF-8
• replace log4j 1.x with 2.13

TODO

• make the Japanese annotation in to English