Minimal working examples for xtensor-r #51
Description
Dear xtensor maintainers,
I recently discovered your xtensor library, and it looks great. I have been trying to get started with it either in C++ or with the associated R package, but unfortunately have not had any success in getting minimal examples to work. I was wondering if you could suggest where I might be missing a step, or if you could provide some minimal working examples.
I have some experience using Rcpp and RcppArmadillo, and my first goal was to use xtensor with R.
However, after installing the 'xtensor' R package, the example on your GitHub page
library('xtensor')
xtensor::rcpp_hello_xtensor(4:12)
failed to work and resulted in the error:
Error: 'rcpp_hello_xtensor' is not an exported object from 'namespace:xtensor'
I looked at your xtensor_r_example() in the documentation for version 0.6.1-0 on CRAN, but could not get that to work without knowing how to define the tensor.
I then tried the sum_of_sines example on your page (within a package framework):
http://xtensor-r.readthedocs.io/en/latest/basic_usage.html
but this resulted in the errors:
clang++ -std=gnu++14 -I"/usr/local/Cellar/r/3.5.0_1/lib/R/include" -DNDEBUG -I"/Users/dean/build/rpackages/Rcpp/include" -I/usr/local/opt/gettext/include -I/usr/local/opt/readline/include -I/usr/local/include -fPIC -g -O2 -c RcppExports.cpp -o RcppExports.o
RcppExports.cpp:9:21: error: use of undeclared identifier 'xt'
double sum_of_sines(xt::rarray<double>& m);
^
RcppExports.cpp:9:38: error: expected '(' for function-style cast or type construction
double sum_of_sines(xt::rarray<double>& m);
~~~~~~^
RcppExports.cpp:9:41: error: use of undeclared identifier 'm'
double sum_of_sines(xt::rarray<double>& m);
^
RcppExports.cpp:14:36: error: use of undeclared identifier 'xt'
Rcpp::traits::input_parameter< xt::rarray<double>& >::type m(mSEXP);
^
RcppExports.cpp:14:53: error: expected '(' for function-style cast or type construction
Rcpp::traits::input_parameter< xt::rarray<double>& >::type m(mSEXP);
~~~~~~^
RcppExports.cpp:14:56: error: expected unqualified-id
Rcpp::traits::input_parameter< xt::rarray<double>& >::type m(mSEXP);
^
RcppExports.cpp:15:47: error: use of undeclared identifier 'm'
rcpp_result_gen = Rcpp::wrap(sum_of_sines(m));
^
7 errors generated.
make: *** [RcppExports.o] Error 1
ERROR: compilation failed for package ‘tryxtensor’
* removing ‘/private/var/folders/5z/g039vypd3d78dm1hr5bwmsk00000gn/T/RtmpGnd8U7/devtools_install_12e97786f506d/tryxtensor’
Error: Command failed (1)
Before I had tried including the line
SystemRequirements: C++14
in the description file, but this did not change the error messages. The above output is after creating a Makevars file containing
CXX1XSTD = -std=gnu++14
I am using Rcpp v0.12.7 (latest release).
After this, I tried to simply get a pure C++ example to work (no R). I am using OSX, and then tried installing xtensor with 'conda', as suggested on your page. I then tried the first example (after enclosing in a main) on
http://xtensor.readthedocs.io/en/latest/basic_usage.html
however, this resulted in numerous error messages. I tried compiling with the standard gcc/g++ compilers on OSX, as well as with the gcc-4.9/g++-4.9 compilers.
After the conda version of xtensor was installed, I tried the xtensor-r examples again, but still received the same error messages.
I apologise for the long post, but I wanted to detail the steps I tried. It seems that R/gcc is not finding the xtensor header files. Any suggestions for fixing this issue, or any minimal working examples for R, would be greatly appreciated.