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Showing results

Remote development in Neovim 🔥

Lua 754 20 Updated Aug 7, 2024

Instant is a modern Firebase. We make you productive by giving your frontend a real-time database.

Clojure 6,804 190 Updated Dec 27, 2024

A smarter cd command. Supports all major shells.

Rust 23,690 566 Updated Dec 25, 2024

This tools counts the number of specific k-mers within sequence data. The counts can then be compare to other counts to determine to compute the probability that sample are of the same origin to di…

C++ 27 1 Updated Nov 25, 2024

High Performance Sorting Based Distributed memory K-mer counter

C++ 11 Updated Jun 26, 2024

Pangenome-based genome inference

C++ 117 11 Updated Dec 3, 2024

Tandem repeat genotyping with long reads

C++ 27 1 Updated Sep 5, 2024

An extremely fast Python package and project manager, written in Rust.

Rust 33,835 913 Updated Dec 29, 2024

High-performance automatic differentiation of LLVM and MLIR.

LLVM 1,312 112 Updated Dec 29, 2024

Constructing a pangenome gene graph

C 175 9 Updated Jul 15, 2024

Genomic Pre-trained Network

Jupyter Notebook 196 24 Updated Dec 14, 2024

VCF visualization interface

HTML 153 47 Updated Dec 20, 2024

Work with bioinformatic files using Arrow, Polars, and/or DuckDB

Rust 166 11 Updated Dec 23, 2024

Characterize 3'UTR variants

R 9 2 Updated Dec 19, 2024

Gene Curator is an open-source platform for managing and curating genetic data. It facilitates gene data analysis, entry, and reporting, serving genetics researchers with tools for efficient data h…

Vue 5 1 Updated Apr 11, 2024

DuckDB is an analytical in-process SQL database management system

C++ 25,319 1,993 Updated Dec 19, 2024
C 107 9 Updated Dec 9, 2024

Structural variant caller for low-depth long-read sequencing data

Python 46 10 Updated Dec 27, 2024

A bioinformatic toolkit to align genome assemblies into pangenome graphs

Julia 90 7 Updated Dec 24, 2024

Dataframes powered by a multithreaded, vectorized query engine, written in Rust

Rust 31,141 2,027 Updated Dec 29, 2024

Command line csv viewer

Rust 2,674 45 Updated Dec 15, 2024

Windows 7/8/8.1/10/11 ISO to Flash Drive burning utility for Linux (MBR/GPT, BIOS/UEFI, FAT32/NTFS)

Shell 696 54 Updated Dec 8, 2022

The Secure Microsoft Windows Downloader

Shell 555 25 Updated May 3, 2024

tools for working with genome variation graphs

C++ 1,134 195 Updated Dec 19, 2024

the pangenome graph builder

Shell 404 44 Updated Nov 25, 2024

Official Implementation of "The Graph Database Interface: Scaling Online Transactional and Analytical Graph Workloads to Hundreds of Thousands of Cores"

C 10 Updated Nov 14, 2023

Allegro is an open-source code for building highly scalable and accurate equivariant deep learning interatomic potentials

Python 366 47 Updated Nov 22, 2024

Kokkos C++ Performance Portability Programming Ecosystem: The Programming Model - Parallel Execution and Memory Abstraction

C++ 2,051 440 Updated Dec 27, 2024

Persistent memory allocator for data-centric analytics

C++ 54 13 Updated Nov 22, 2024

Manage your dotfiles across multiple diverse machines, securely.

Go 13,699 498 Updated Dec 29, 2024
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