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The WinApps uninstall option only removes the WinApps integration layer: the winapps/winapps-setup scripts, generated .desktop launchers, app data/icons, and protocol handler entries. It does not remove or disable the Windows VM/container that WinApps connects to. That is why Windows can still start after winapps-setup --system --uninstall.

Check which backend you used and stop/disable that part separately:

# Docker backend
docker ps -a --filter name=WinApps
docker compose --file ~/.config/winapps/compose.yaml down

# If you really want to remove the Windows container disk too:
docker compose --file ~/.config/winapps/compose.yaml down --rmi=all --volumes

For Podman, use the same idea with p…

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@Bum-ux
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