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actions-user committed Apr 16, 2024
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2 changes: 2 additions & 0 deletions pathways/WP440/WP440-bibliography.tsv
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ID Database Citation
9409150 Pubmed "Metabolism of sulfur amino acids in Saccharomyces cerevisiae. Thomas D, Surdin-Kerjan Y. Microbiol Mol Biol Rev. 1997 Dec;61(4):503–32. <a href=""http://www.ncbi.nlm.nih.gov/pubmed/9409150"" target=""_blank"" class=""external"" rel=""nofollow"">PubMed</a> <a href=""https://europepmc.org/abstract/MED/9409150"" target=""_blank"" class=""external"" rel=""nofollow"">Europe PMC</a> <a href=""https://scholia.toolforge.org/pubmed/9409150"" target=""_blank"" class=""external"" rel=""nofollow"">Scholia</a>"
25 changes: 25 additions & 0 deletions pathways/WP440/WP440-datanodes.tsv
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Label Type Identifier Comment Ensembl NCBI gene HGNC UniProt Wikidata ChEBI InChI
Sulfite Metabolite hmdb:HMDB0000240 "" chebi:48854;chebi:48854 inchikey:LSNNMFCWUKXFEE-UHFFFAOYSA-N
cystathionine Metabolite cas:56-88-2 "" wikidata:Q28529685;wikidata:Q106345609 chebi:58161;chebi:17482;chebi:17482;chebi:58161 inchikey:ILRYLPWNYFXEMH-WHFBIAKZSA-N
ATP Metabolite cas:1927-31-7 "" wikidata:Q201090 chebi:16284;chebi:16284 inchikey:SUYVUBYJARFZHO-RRKCRQDMSA-N
Sulfate Metabolite hmdb:HMDB0001448 "" chebi:26836;chebi:26836 inchikey:QAOWNCQODCNURD-UHFFFAOYSA-N
Adenosine phosphosulfate Metabolite hmdb:HMDB0001003 "" chebi:17709;chebi:17709 inchikey:IRLPACMLTUPBCL-KQYNXXCUSA-N
Tetrahydropteroyltri-L-glutamate Metabolite chebi:17420 "" wikidata:Q27102390 chebi:17420;chebi:17420 inchikey:RXWVHRYZTWZATH-XSLAGTTESA-N
homocysteine Metabolite cas:6027-13-0 "" wikidata:Q26992833;wikidata:Q106345493 chebi:58199;chebi:58199;chebi:17588;chebi:17588 inchikey:FFFHZYDWPBMWHY-VKHMYHEASA-N
H2O Metabolite hmdb:HMDB02111 "" wikidata:Q283 chebi:15377;chebi:15377 inchikey:XLYOFNOQVPJJNP-UHFFFAOYSA-N
pyrophosphate Metabolite cas:2466-09-3 "" wikidata:Q411092 chebi:29888;chebi:29888 inchikey:XPPKVPWEQAFLFU-UHFFFAOYSA-N
O-acetyl-L-serine Metabolite cas:5147-00-2 "" wikidata:Q106345618;wikidata:Q309897 chebi:58340;chebi:58340;chebi:17981;chebi:17981 inchikey:VZXPDPZARILFQX-BYPYZUCNSA-N
NH3 pyruvate Metabolite pubchem.compound:10129915 "" wikidata:Q85977039 inchikey:VRYNVZJQBANJOF-UHFFFAOYSA-N
O-phospho-L-homoserine Metabolite chebi:15961 "" wikidata:Q27098324 chebi:15961;chebi:15961 inchikey:FXDNYOANAXWZHG-VKHMYHEASA-N
5-Methyltetrahydropteroyltri-L-glutamate Metabolite chebi:17614 "" wikidata:Q27102479 chebi:17614;chebi:17614 inchikey:HVRNKDVLFAVCJF-VJANTYMQSA-N
L-Methionine Metabolite hmdb:HMDB0000696 "" chebi:16643;chebi:16643 inchikey:FFEARJCKVFRZRR-BYPYZUCNSA-N
L-cysteine Metabolite cas:52-90-4 "" wikidata:Q106345475;wikidata:Q186474 chebi:35235;chebi:17561;chebi:17561;chebi:35235 inchikey:XUJNEKJLAYXESH-REOHCLBHSA-N
phosphate Metabolite cas:14265-44-2 "" wikidata:Q177811 chebi:26078;chebi:18367;chebi:26078;chebi:18367 inchikey:NBIIXXVUZAFLBC-UHFFFAOYSA-K;inchikey:NBIIXXVUZAFLBC-UHFFFAOYSA-N
Oxidized ferredoxin Metabolite chebi:17908 "" chebi:17908
Reduced ferredoxin Metabolite chebi:17513 "" chebi:17513
Sulfide Metabolite hmdb:HMDB0000598 "" chebi:15138;chebi:15138 inchikey:UCKMPCXJQFINFW-UHFFFAOYSA-N
acetate Metabolite cas:64-19-7 "" wikidata:Q47512 chebi:15366;chebi:15366 inchikey:QTBSBXVTEAMEQO-UHFFFAOYSA-N
MET6 GeneProduct sgd:S000000893 "" ensembl:YER091C ncbigene:856825 uniprot:P05694
MET3 GeneProduct sgd:S000003771 "" ensembl:YJR010W ncbigene:853466 uniprot:P08536
STR3 GeneProduct sgd:S000003152 "" ensembl:YGL184C ncbigene:852691 uniprot:P53101
YGR012W GeneProduct sgd:S000003244 "" ensembl:YGR012W ncbigene:852895 uniprot:P53206
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