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pmcfigurebot

Query figures indexed by PubMed Central and collect metadata

PubMed Image Query

The GitHub Action is configured to run scripts/fetch_figures_v2.R on demand and quarterly in order to query PMC for any new figures published since the last run. The script downloads .jpg files and prepares a .yml file with metadata for each figure and its parent paper.

Request Your Own Figure

Open an issue using the Fetch this figure providing a PMCID and a figure number. This will trigger the repo to collect this figure and add it to the queue for the next run of the PFOCR pipeline.

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Query figures indexed by PubMed Central and collect metadata

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