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Issues list

Error pulling new singularity image
#247 opened Nov 28, 2024 by michaelplynch
errors with pystan and consensus.py
#246 opened Oct 4, 2024 by kkarlins
Interpretation of Clustering Results and PCA Analysis in Souporcell
#241 opened Jul 31, 2024 by lllifan
1
Need help separating fetal from maternal cells in placenta
#240 opened Jul 31, 2024 by bkheira
3
vcf file wget command does not bypass google drive virus scanning
#236 opened Jun 14, 2024 by EDePasquale
2
Ambiguous sample labeling for some souporcell clusters
#234 opened May 7, 2024 by aranham
1
How to obtain the counts matrix with ambient RNA removed?
#233 opened May 7, 2024 by wangdlpbr
5
doublet detection errors with troublet: non-zero exit status and index out of bounds
#231 opened Apr 27, 2024 by shirshuj
22
Licensed conda channels
#230 opened Apr 26, 2024 by trum994
2
Matching cluster label to origin sample id
#228 opened Apr 22, 2024 by elemesemele
3
No doublet output = 0 doublets?
#226 opened Mar 22, 2024 by bpyenson
1
freebayes subprocess terminated error
#225 opened Mar 18, 2024 by Huimin721
1
Differentiation of maternal and fetal sources
#224 opened Mar 17, 2024 by Jylab-Genetics
Souporcell running w/ aneuploidy sample
#223 opened Mar 13, 2024 by hypaik
6
Barcodes displayed in github page text not found in souporcell test output
#222 opened Mar 5, 2024 by No2Ross
souporcells runs without common variants but when I add the VCF file it breaks
#221 opened Mar 5, 2024 by Ahmedalaraby20
vartrix error
#219 opened Feb 7, 2024 by liym0758
How to calculate likehood （Unknown number of mixed samples split）
#217 opened Jan 22, 2024 by licongge
6
GPU_accelerator
#216 opened Jan 2, 2024 by zheng-sc
9
Understanding the barcodes command
#215 opened Dec 18, 2023 by Thapeachydude
1
troublet command error
#212 opened Nov 10, 2023 by zchatt
7
sparse mixture model clustering result
#210 opened Nov 6, 2023 by Huimin721
5
Singularity Image is broken
#209 opened Nov 3, 2023 by SimonDMurray
3
clustering plot (Figure 1e)
#206 opened Sep 27, 2023 by daccachejoe
6
Error occurred when running souporcell.
#205 opened Sep 24, 2023 by xliu-ucas
1
ProTip! Exclude everything labeled bug with -label:bug.