Update

vitessce · Sep 7, 2024 · 37f97c3 · 37f97c3
1 parent c2a3519
commit 37f97c3
Showing 1 changed file with 0 additions and 17 deletions.
diff --git a/tests/test_wrappers.py b/tests/test_wrappers.py
@@ -239,23 +239,6 @@ def test_anndata_with_base_dir(self):
                                         'obsSets': [{'path': 'obs/CellType', 'name': 'Cell Type'}]
                                     }})
 
-    def test_anndata(self):
-        adata_path = data_path / 'test.h5ad.zarr'
-        w = AnnDataWrapper(adata_path,
-                           obs_set_paths=['obs/CellType'], obs_set_names=['Cell Type'],
-                           obs_labels_names=['Cell Label'], obs_labels_paths=['obs/CellLabel'],
-                           obs_embedding_paths=['obsm/X_umap'], obs_embedding_names=['UMAP'])
-        w.local_dir_uid = 'anndata.zarr'
-
-        file_def_creator = w.make_file_def_creator('A', 0)
-        file_def = file_def_creator('http://localhost:8000')
-        self.assertEqual(file_def, {'fileType': 'anndata.zarr', 'url': 'http://localhost:8000/A/0/anndata.zarr',
-                                    'options': {
-                                        'obsEmbedding': [{'path': 'obsm/X_umap', 'embeddingType': 'UMAP', 'dims': [0, 1]}],
-                                        'obsSets': [{'path': 'obs/CellType', 'name': 'Cell Type'}],
-                                        'obsLabels': [{'path': 'obs/CellLabel', 'obsLabelsType': 'Cell Label'}]
-                                    }})
-
     def test_anndata_with_h5ad_and_ref_json(self):
         adata_path = data_path / 'test.h5ad'
         ref_json_path = data_path / 'test.h5ad.ref.json'