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virtualcell / vcell Public

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support for local field data and SBML I/O in libvcell#1475

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jcschaff wants to merge 12 commits intomastervirtualcell/vcell:masterfrom

local-image-fielddatavirtualcell/vcell:local-image-fielddataCopy head branch name to clipboard

Conversation Commits12 (12)Checks Files changed

Open

support for local field data and SBML I/O in libvcell#1475
jcschaff wants to merge 12 commits intomasterfrom
local-image-fielddata

Commits

Commits on Aug 13, 2025

make DataSet.read() public to read fielddata files from libvcell
jcschaff
committed
need access to DataSet constructor and variableType from libvcell
jcschaff
committed
BeanUtils.cloneSerializable() to XmlHelper.clone() with xml for libvcell
jcschaff
committed
deepClone() for BNG Spec objects
jcschaff
committed
deepClone surfaces
jcschaff
committed
deep clone some math objects
jcschaff
committed
restored Bean.cloneSerializable for unimplemented deepClone()
jcschaff
committed
added fault for INCONSISTENT_UNIT_SYSTEM (ng is not moles or molecules)
jcschaff
committed
project BNGOutputSpec.deepClone() against null arrays
jcschaff
committed
clear symbol table bindings upon cloning expressions
jcschaff
committed
set XmlHelper.cloneUsingXml to False (except libvcell)
jcschaff
committed
roll back KMOLE math gen failure when XML clone
jcschaff
committed

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