Gen ai dev

.github/workflows/chatops.yml

@@ -10,7 +10,7 @@ jobs:
     runs-on: ubuntu-latest
     steps:
       - name: dispatch
-        uses: peter-evans/slash-command-dispatch@v3.0.1
+        uses: peter-evans/slash-command-dispatch@v4.0.0
         with:
           token: ${{ secrets.PR_MAINTAIN }}
           reaction-token: ${{ secrets.GITHUB_TOKEN }}

.github/workflows/codeql-analysis.yml

@@ -42,7 +42,7 @@ jobs:
 
     # Initializes the CodeQL tools for scanning.
     - name: Initialize CodeQL
-      uses: github/codeql-action/init@v2
+      uses: github/codeql-action/init@v3
       with:
         languages: ${{ matrix.language }}
         # If you wish to specify custom queries, you can do so here or in a config file.
@@ -72,4 +72,4 @@ jobs:
         BUILD_MONAI=1 ./runtests.sh --build
 
     - name: Perform CodeQL Analysis
-      uses: github/codeql-action/analyze@v2
+      uses: github/codeql-action/analyze@v3

.github/workflows/conda.yml

@@ -26,7 +26,7 @@ jobs:
     steps:
     - if: runner.os == 'windows'
       name: Config pagefile (Windows only)
-      uses: al-cheb/configure-pagefile-action@v1.3
+      uses: al-cheb/configure-pagefile-action@v1.4
       with:
         minimum-size: 8GB
         maximum-size: 16GB

.github/workflows/cron-ngc-bundle.yml

@@ -19,14 +19,14 @@ jobs:
     steps:
     - uses: actions/checkout@v4
     - name: Set up Python 3.8
-      uses: actions/setup-python@v4
+      uses: actions/setup-python@v5
       with:
         python-version: '3.8'
     - name: cache weekly timestamp
       id: pip-cache
       run: echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: ~/.cache/pip

.github/workflows/cron.yml

@@ -19,18 +19,18 @@ jobs:
           - "PTLATEST+CUDA121"
         include:
           # https://docs.nvidia.com/deeplearning/frameworks/pytorch-release-notes
-          - environment: PT191+CUDA113
-            pytorch: "torch==1.9.1 torchvision==0.10.1 --extra-index-url https://download.pytorch.org/whl/cu113"
-            base: "nvcr.io/nvidia/pytorch:21.06-py3"  # CUDA 11.3
           - environment: PT110+CUDA113
             pytorch: "torch==1.10.2 torchvision==0.11.3 --extra-index-url https://download.pytorch.org/whl/cu113"
             base: "nvcr.io/nvidia/pytorch:21.06-py3"  # CUDA 11.3
           - environment: PT113+CUDA113
             pytorch: "torch==1.13.1 torchvision==0.14.1 --extra-index-url https://download.pytorch.org/whl/cu113"
             base: "nvcr.io/nvidia/pytorch:21.06-py3"  # CUDA 11.3
-          - environment: PTLATEST+CUDA121
-            pytorch: "-U torch torchvision --extra-index-url https://download.pytorch.org/whl/cu118"
+          - environment: PT113+CUDA122
+            pytorch: "torch==1.13.1 torchvision==0.14.1 --extra-index-url https://download.pytorch.org/whl/cu121"
             base: "nvcr.io/nvidia/pytorch:23.08-py3"  # CUDA 12.2
+          - environment: PTLATEST+CUDA124
+            pytorch: "-U torch torchvision --extra-index-url https://download.pytorch.org/whl/cu121"
+            base: "nvcr.io/nvidia/pytorch:24.03-py3"  # CUDA 12.4
     container:
       image: ${{ matrix.base }}
       options: "--gpus all"
@@ -67,7 +67,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v3
+      uses: codecov/codecov-action@v4
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -76,7 +76,7 @@ jobs:
     if: github.repository == 'Project-MONAI/MONAI'
     strategy:
       matrix:
-        container: ["pytorch:22.10", "pytorch:23.08"]
+        container: ["pytorch:23.08", "pytorch:24.03"]
     container:
       image: nvcr.io/nvidia/${{ matrix.container }}-py3  # testing with the latest pytorch base image
       options: "--gpus all"
@@ -111,7 +111,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v3
+      uses: codecov/codecov-action@v4
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -121,7 +121,7 @@ jobs:
     if: github.repository == 'Project-MONAI/MONAI'
     strategy:
       matrix:
-        container: ["pytorch:23.08"]
+        container: ["pytorch:24.03"]
     container:
       image: nvcr.io/nvidia/${{ matrix.container }}-py3  # testing with the latest pytorch base image
       options: "--gpus all"
@@ -212,7 +212,7 @@ jobs:
         if pgrep python; then pkill python; fi
       shell: bash
     - name: Upload coverage
-      uses: codecov/codecov-action@v3
+      uses: codecov/codecov-action@v4
       with:
         fail_ci_if_error: false
         files: ./coverage.xml
@@ -221,7 +221,7 @@ jobs:
     if: github.repository == 'Project-MONAI/MONAI'
     needs: cron-gpu  # so that monai itself is verified first
     container:
-      image: nvcr.io/nvidia/pytorch:23.08-py3  # testing with the latest pytorch base image
+      image: nvcr.io/nvidia/pytorch:24.03-py3  # testing with the latest pytorch base image
       options: "--gpus all --ipc=host"
     runs-on: [self-hosted, linux, x64, integration]
     steps:

.github/workflows/docker.yml

@@ -17,7 +17,8 @@ jobs:
   versioning_dev:
     # compute versioning file from python setup.py
     # upload as artifact
-    if: github.repository == 'Project-MONAI/MONAI'
+    # if: github.repository == 'Project-MONAI/MONAI'
+    if: ${{ false }}  # disable docker build job  project-monai/monai#7450
     runs-on: ubuntu-latest
     steps:
       - uses: actions/checkout@v4
@@ -26,7 +27,7 @@ jobs:
           ref: dev
           fetch-depth: 0
       - name: Set up Python 3.9
-        uses: actions/setup-python@v4
+        uses: actions/setup-python@v5
         with:
           python-version: '3.9'
       - shell: bash
@@ -36,7 +37,7 @@ jobs:
           python setup.py build
           cat build/lib/monai/_version.py
       - name: Upload version
-        uses: actions/upload-artifact@v3
+        uses: actions/upload-artifact@v4
         with:
           name: _version.py
           path: build/lib/monai/_version.py
@@ -47,22 +48,22 @@ jobs:
           rm -rf {*,.[^.]*}
 
   docker_build_dev:
-    # builds projectmonai/monai:latest
-    if: github.repository == 'Project-MONAI/MONAI'
+    # if: github.repository == 'Project-MONAI/MONAI'
+    if: ${{ false }}  # disable docker build job  project-monai/monai#7450
     needs: versioning_dev
     runs-on: ubuntu-latest
     steps:
     - uses: actions/checkout@v4
       with:
         ref: dev
     - name: Download version
-      uses: actions/download-artifact@v3
+      uses: actions/download-artifact@v4
       with:
         name: _version.py
     - name: docker_build
       shell: bash
       run: |
-        rm -rf /opt/hostedtoolcache
+        find /opt/hostedtoolcache/* -maxdepth 0 ! -name 'Python' -exec rm -rf {} \;
         docker --version
         # get tag info for versioning
         cat _version.py

.github/workflows/integration.yml

@@ -22,7 +22,7 @@ jobs:
       id: pip-cache
       run: echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: |
@@ -71,7 +71,7 @@ jobs:
       run: ./runtests.sh --build --net
 
     - name: Add reaction
-      uses: peter-evans/create-or-update-comment@v3
+      uses: peter-evans/create-or-update-comment@v4
       with:
         token: ${{ secrets.PR_MAINTAIN }}
         repository: ${{ github.event.client_payload.github.payload.repository.full_name }}
@@ -95,7 +95,7 @@ jobs:
       id: pip-cache
       run: echo "datew=$(date '+%Y-%V')" >> $GITHUB_OUTPUT
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: |
@@ -151,7 +151,7 @@ jobs:
         python -m tests.test_integration_gpu_customization
 
     - name: Add reaction
-      uses: peter-evans/create-or-update-comment@v3
+      uses: peter-evans/create-or-update-comment@v4
       with:
         token: ${{ secrets.PR_MAINTAIN }}
         repository: ${{ github.event.client_payload.github.payload.repository.full_name }}

.github/workflows/pythonapp-gpu.yml

@@ -29,10 +29,6 @@ jobs:
           - "PT210+CUDA121DOCKER"
         include:
           # https://docs.nvidia.com/deeplearning/frameworks/pytorch-release-notes
-          - environment: PT19+CUDA114DOCKER
-            # 21.10: 1.10.0a0+0aef44c
-            pytorch: "-h"  # we explicitly set pytorch to -h to avoid pip install error
-            base: "nvcr.io/nvidia/pytorch:21.10-py3"
           - environment: PT110+CUDA111
             pytorch: "torch==1.10.2 torchvision==0.11.3 --extra-index-url https://download.pytorch.org/whl/cu111"
             base: "nvcr.io/nvidia/cuda:11.1.1-devel-ubuntu18.04"
@@ -47,6 +43,10 @@ jobs:
             # 23.08: 2.1.0a0+29c30b1
             pytorch: "-h"  # we explicitly set pytorch to -h to avoid pip install error
             base: "nvcr.io/nvidia/pytorch:23.08-py3"
+          - environment: PT210+CUDA121DOCKER
+            # 24.03: 2.3.0a0+40ec155e58.nv24.3
+            pytorch: "-h"  # we explicitly set pytorch to -h to avoid pip install error
+            base: "nvcr.io/nvidia/pytorch:24.03-py3"
     container:
       image: ${{ matrix.base }}
       options: --gpus all --env NVIDIA_DISABLE_REQUIRE=true  # workaround for unsatisfied condition: cuda>=11.6
@@ -137,6 +137,6 @@ jobs:
       shell: bash
     - name: Upload coverage
       if: ${{ github.head_ref != 'dev' && github.event.pull_request.merged != true }}
-      uses: codecov/codecov-action@v3
+      uses: codecov/codecov-action@v4
       with:
         files: ./coverage.xml

.github/workflows/pythonapp-min.yml

@@ -9,6 +9,8 @@ on:
       - main
       - releasing/*
   pull_request:
+    head_ref-ignore:
+      - dev
 
 concurrency:
   # automatically cancel the previously triggered workflows when there's a newer version
@@ -30,7 +32,7 @@ jobs:
     steps:
     - uses: actions/checkout@v4
     - name: Set up Python 3.8
-      uses: actions/setup-python@v4
+      uses: actions/setup-python@v5
       with:
         python-version: '3.8'
     - name: Prepare pip wheel
@@ -44,7 +46,7 @@ jobs:
         echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
       shell: bash
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: ${{ steps.pip-cache.outputs.dir }}
@@ -76,7 +78,7 @@ jobs:
     steps:
     - uses: actions/checkout@v4
     - name: Set up Python ${{ matrix.python-version }}
-      uses: actions/setup-python@v4
+      uses: actions/setup-python@v5
       with:
         python-version: ${{ matrix.python-version }}
     - name: Prepare pip wheel
@@ -90,7 +92,7 @@ jobs:
         echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
       shell: bash
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: ${{ steps.pip-cache.outputs.dir }}
@@ -121,7 +123,7 @@ jobs:
     steps:
     - uses: actions/checkout@v4
     - name: Set up Python 3.8
-      uses: actions/setup-python@v4
+      uses: actions/setup-python@v5
       with:
         python-version: '3.8'
     - name: Prepare pip wheel
@@ -135,7 +137,7 @@ jobs:
         echo "dir=$(pip cache dir)" >> $GITHUB_OUTPUT
       shell: bash
     - name: cache for pip
-      uses: actions/cache@v3
+      uses: actions/cache@v4
       id: cache
       with:
         path: ${{ steps.pip-cache.outputs.dir }}