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vgteam

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  1. vg vg Public

    tools for working with genome variation graphs

    C++ 1.3k 225

  2. libbdsg libbdsg Public

    Optimized sequence graph implementations for graph genomics

    C++ 36 9

  3. libhandlegraph libhandlegraph Public

    Library for the Handle Graph abstraction

    C++ 25 6

  4. toil-vg toil-vg Public

    Distributed and cloud computing framework for vg

    Python 23 12

Repositories

Showing 10 of 60 repositories
  • vg Public

    tools for working with genome variation graphs

    vgteam/vg's past year of commit activity
    C++ 1,344 225 357 (5 issues need help) 31 Updated Oct 13, 2026
  • giraffe-parameter-search Public

    Workflow for testing vg giraffe parameters

    vgteam/giraffe-parameter-search's past year of commit activity
    Python 0 MIT 0 1 0 Updated Oct 13, 2026
  • libbdsg Public

    Optimized sequence graph implementations for graph genomics

    vgteam/libbdsg's past year of commit activity
    C++ 36 MIT 9 26 10 Updated Oct 13, 2026
  • vg_ci_prebake Public

    Prebaked Docker image to speed up VG CI

    vgteam/vg_ci_prebake's past year of commit activity
    Dockerfile 0 MIT 0 0 0 Updated Oct 12, 2026
  • sdsl-lite Public Forked from simongog/sdsl-lite

    Succinct Data Structure Library 2.0

    vgteam/sdsl-lite's past year of commit activity
    C++ 11 372 0 0 Updated Oct 10, 2026
  • dind Public Forked from jpetazzo/dind

    Docker in Docker

    vgteam/dind's past year of commit activity
    Shell 0 Apache-2.0 569 0 0 Updated Oct 10, 2026
  • libvgio Public

    A dynamic library that provides io for the vg toolkit.

    vgteam/libvgio's past year of commit activity
    C++ 9 12 6 7 Updated Oct 10, 2026
  • libbdsg-easy Public

    Easy installation for libbdsg

    vgteam/libbdsg-easy's past year of commit activity
    Makefile 0 2 0 0 Updated Oct 6, 2026
  • vcflib Public Forked from vcflib/vcflib

    a simple C++ library for parsing and manipulating VCF files, + many command-line utilities

    vgteam/vcflib's past year of commit activity
    C++ 1 MIT 224 0 1 Updated Oct 2, 2026
  • dozeu Public Forked from ocxtal/dozeu

    SIMD-parallel BLAST X-drop DP on sequence graphs

    vgteam/dozeu's past year of commit activity
    C 1 8 0 1 Updated Aug 25, 2026
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