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  1. vg vg Public

    tools for working with genome variation graphs

    C++ 1.3k 210

  2. libbdsg libbdsg Public

    Optimized sequence graph implementations for graph genomics

    C++ 34 6

  3. libhandlegraph libhandlegraph Public

    Library for the Handle Graph abstraction

    C++ 24 6

  4. toil-vg toil-vg Public

    Distributed and cloud computing framework for vg

    Python 23 14

Repositories

Showing 10 of 55 repositories
  • libbdsg Public

    Optimized sequence graph implementations for graph genomics

    vgteam/libbdsg’s past year of commit activity
    C++ 34 MIT 6 24 10 Updated Nov 27, 2025
  • vg Public

    tools for working with genome variation graphs

    vgteam/vg’s past year of commit activity
    C++ 1,265 210 875 (9 issues need help) 7 Updated Nov 27, 2025
  • dind Public Forked from jpetazzo/dind

    Docker in Docker

    vgteam/dind’s past year of commit activity
    Shell 0 Apache-2.0 576 0 0 Updated Nov 26, 2025
  • vg_snakemake Public

    Snakemake workflow for the vg toolkit.

    vgteam/vg_snakemake’s past year of commit activity
    Python 10 GPL-3.0 5 0 1 Updated Nov 26, 2025
  • libvgio Public

    A dynamic library that provides io for the vg toolkit.

    vgteam/libvgio’s past year of commit activity
    C++ 9 7 6 2 Updated Nov 21, 2025
  • recombination-aware-giraffe-experiments Public Forked from vgteam/long-read-giraffe-experiments

    Experimental materials for testing the recombination-aware mapping abilities of vg giraffe

    vgteam/recombination-aware-giraffe-experiments’s past year of commit activity
    Python 0 1 0 0 Updated Nov 18, 2025
  • vg_wdl Public

    Workflow Description Language (WDL) scripts for common vg workflows

    vgteam/vg_wdl’s past year of commit activity
    WDL 20 MIT 11 15 2 Updated Nov 14, 2025
  • sequenceTubeMap Public

    displays multiple genomic sequences in the form of a tube map

    vgteam/sequenceTubeMap’s past year of commit activity
    JavaScript 207 MIT 30 91 (2 issues need help) 9 Updated Nov 12, 2025
  • xg Public

    xg0: a simpler xg index

    vgteam/xg’s past year of commit activity
    C++ 5 4 6 2 Updated Nov 3, 2025
  • long-read-giraffe-experiments Public

    Experimental materials for testing the long-read mapping abilities of vg giraffe

    vgteam/long-read-giraffe-experiments’s past year of commit activity
    Python 5 1 20 0 Updated Nov 1, 2025
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