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Update db nov 2023 #16

Merged
merged 4 commits into from
Nov 22, 2023
Merged

Update db nov 2023 #16

merged 4 commits into from
Nov 22, 2023

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brendanreardon
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@brendanreardon brendanreardon commented Nov 22, 2023

This pull request updates the MOAlmanac database to the 2023-11-09 release. In this release, the preferred_assertion field of the schema was deprecated in favor of publication_date and last_updated.

Additions:

  • An example input data for COSMIC mutational signatures has been added.

Revisions:

  • The underlying moalmanac database was updated to v.2023-11-09
  • The annotation to the MOAlmanac database was updated to sort by the evidence type, publication date of the source, and then when the database record was last updated.

Pre-pull request check list,

  • Relevant documentation has been updated
  • All unit tests pass
  • All outputs pre- and post- changes match by md5 hash
  • All files changed have been reviewed

@brendanreardon brendanreardon merged commit f8c4501 into main Nov 22, 2023
@brendanreardon brendanreardon deleted the update-db-nov-2023 branch November 22, 2023 15:18
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