Integrate MCP tool support and async tool execution

README.md

@@ -1,14 +1,11 @@
 # 🧠 SGR Deep Research - Open-Source Schema-Guided Reasoning System
 
-
 ## SGR Deep Research is an agent-driven research system with a chat interface. It is can run with small LLMs for a fully local mode.
 
-This project is developed by the **neuraldeep** community. It is inspired by the Schema-Guided Reasoning (SGR) work and [SGR Agent Demo](https://abdullin.com/schema-guided-reasoning/demo) delivered by "LLM Under the Hood" community and AI R&D Hub of [TIMETOACT GROUP Österreich](
-https://www.timetoact-group.at)
+This project is developed by the **neuraldeep** community. It is inspired by the Schema-Guided Reasoning (SGR) work and [SGR Agent Demo](https://abdullin.com/schema-guided-reasoning/demo) delivered by "LLM Under the Hood" community and AI R&D Hub of [TIMETOACT GROUP Österreich](https://www.timetoact-group.at)
 
 If you have any questions - feel free to reach out to [Valerii Kovalskii](https://www.linkedin.com/in/vakovalskii/).
 
-
 Web Interface Video
 
 https://github.com/user-attachments/assets/9e1c46c0-0c13-45dd-8b35-a3198f946451

config.yaml.example

@@ -36,3 +36,23 @@ execution:
 prompts:
   prompts_dir: "prompts"               # Directory with prompts
   system_prompt_file: "system_prompt.txt"  # System prompt file
+
+# Logging Settings
+logging:
+  config_file: "logging_config.yaml"  # Logging configuration file path
+
+mcp:
+
+  # Limit on the result of MCP tool invocation.
+  # A balanced constant value: not too large to avoid filling the entire context window with potentially unimportant data,
+  # yet not too small to ensure critical information from a single MCP fits through
+  context_limit: 15000
+
+  # https://gofastmcp.com/clients/transports#mcp-json-configuration-transport
+  transport_config:
+    mcpServers:
+      deepwiki:
+        url: "https://mcp.deepwiki.com/mcp"
+
+      context7:
+        url: "https://mcp.context7.com/mcp"

logging_config.yaml

@@ -0,0 +1,45 @@
+# SGR Deep Research - Logging Configuration
+# Based on Python logging.config dictionary schema
+# https://docs.python.org/3/library/logging.config.html#configuration-dictionary-schema
+
+version: 1
+disable_existing_loggers: false
+
+formatters:
+  standard:
+    format: '%(asctime)s - %(name)s - %(lineno)d - %(levelname)s - %(message)s'
+
+handlers:
+  console:
+    class: logging.StreamHandler
+    level: INFO
+    formatter: standard
+    stream: ext://sys.stdout
+
+  console_error:
+    class: logging.StreamHandler
+    level: ERROR
+    formatter: standard
+    stream: ext://sys.stderr
+
+loggers:
+  # Main application logger - all our modules inherit from it
+  root:
+    level: INFO
+    handlers: [ console, console_error ]
+
+
+  sgr_deep_research:
+    level: INFO
+
+  sgr_deep_research.agents:
+    level: INFO
+
+  httpx:
+    level: WARNING
+
+  mcp:
+    level: WARNING
+
+  urllib3:
+    level: WARNING

pyproject.toml

@@ -51,7 +51,9 @@ dependencies = [
     "pydantic-settings>=2.10.1",
     "fastapi>=0.116.1",
     "uvicorn>=0.35.0",
-    "lxml<6"
+    "lxml<6",
+    "fastmcp>=2.12.4",
+    "jambo>=0.1.3.post2",
 ]
 
 [project.urls]

services/api_service/Dockerfile

@@ -5,6 +5,7 @@ ENV UV_COMPILE_BYTECODE=1 \
     UV_PYTHON_DOWNLOADS=0 \
     UV_PROJECT_ENVIRONMENT=/opt/venv
 
+
 WORKDIR /app
 
 COPY requirements.txt ./