Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Update testing sample for v6.0.0-rc.1 #170

Merged
merged 18 commits into from
Mar 12, 2024
Merged

Update testing sample for v6.0.0-rc.1 #170

merged 18 commits into from
Mar 12, 2024

Commits on Mar 7, 2024

  1. Switch align-DNA test to Illumina sample

    @yashpatel6
    yashpatel6 committed Mar 7, 2024
    Configuration menu
    Copy the full SHA
    ae09074 View commit details
    Browse the repository at this point in the history

  2. Update BAM2FASTQ test

    @yashpatel6
    yashpatel6 committed Mar 7, 2024
    Configuration menu
    Copy the full SHA
    34b2c0d View commit details
    Browse the repository at this point in the history

Commits on Mar 8, 2024

  1. Update sample for recalibrate-BAM

    @yashpatel6
    yashpatel6 committed Mar 8, 2024
    Configuration menu
    Copy the full SHA
    0b02671 View commit details
    Browse the repository at this point in the history

  2. Update sample for calculate-targeted-coverage

    @yashpatel6
    yashpatel6 committed Mar 8, 2024
    Configuration menu
    Copy the full SHA
    da72ab1 View commit details
    Browse the repository at this point in the history

  3. Update tests for call-gSNP and call-sSNV

    @yashpatel6
    yashpatel6 committed Mar 8, 2024
    Configuration menu
    Copy the full SHA
    f798542 View commit details
    Browse the repository at this point in the history

  4. Update samples for call-gSNP and call-sSNV

    @yashpatel6
    yashpatel6 committed Mar 8, 2024
    Configuration menu
    Copy the full SHA
    18e5610 View commit details
    Browse the repository at this point in the history

  5. Update sample for call-mtSNV

    @yashpatel6
    yashpatel6 committed Mar 8, 2024
    Configuration menu
    Copy the full SHA
    9452c08 View commit details
    Browse the repository at this point in the history

Commits on Mar 9, 2024

  1. Update sample for call-gSV

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    92282c6 View commit details
    Browse the repository at this point in the history

  2. Update sample for call-sSV

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    065a1fd View commit details
    Browse the repository at this point in the history

  3. Update test cases

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    96f5322 View commit details
    Browse the repository at this point in the history

  4. Update sample for sCNA

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    f838af9 View commit details
    Browse the repository at this point in the history

  5. Update metapipeline_dna.nf test

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    659248f View commit details
    Browse the repository at this point in the history

  6. Add sCNA assertion back

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    a6df628 View commit details
    Browse the repository at this point in the history

  7. Update BAM entry batch test

    @yashpatel6
    yashpatel6 committed Mar 9, 2024
    Configuration menu
    Copy the full SHA
    a02109c View commit details
    Browse the repository at this point in the history

Commits on Mar 10, 2024

  1. Update FASTQ input test

    @yashpatel6
    yashpatel6 committed Mar 10, 2024
    Configuration menu
    Copy the full SHA
    1610ef0 View commit details
    Browse the repository at this point in the history

Commits on Mar 11, 2024

  1. Update CHANGELOG

    @yashpatel6
    yashpatel6 committed Mar 11, 2024
    Configuration menu
    Copy the full SHA
    d2c5d33 View commit details
    Browse the repository at this point in the history

  2. Update nextflow.config

    @yashpatel6
    yashpatel6 committed Mar 11, 2024
    Configuration menu
    Copy the full SHA
    7e62e2e View commit details
    Browse the repository at this point in the history

  3. Update to common paths

    @yashpatel6
    yashpatel6 committed Mar 11, 2024
    Configuration menu
    Copy the full SHA
    661bdfe View commit details
    Browse the repository at this point in the history