add nextflow instruction (#177) #21
Workflow file for this run
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| name: Push Stata User-licensed Image to quay | |
| on: | |
| push: | |
| paths: | |
| - jupyter-pystata-user-licensed/** | |
| - .github/workflows/build_push_stata_user_licensed.yml | |
| workflow_dispatch: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Maximize build space | |
| uses: easimon/maximize-build-space@master | |
| with: | |
| root-reserve-mb: 30000 | |
| swap-size-mb: 1024 | |
| remove-dotnet: 'true' | |
| remove-android: 'true' | |
| remove-haskell: 'true' | |
| - uses: actions/checkout@v2 | |
| - uses: prewk/s3-cp-action@v0.1.1 | |
| env: | |
| AWS_ACCESS_KEY_ID: ${{ secrets.AWS_ACCESS_KEY_ID }} | |
| AWS_SECRET_ACCESS_KEY: ${{ secrets.AWS_SECRET_ACCESS_KEY }} | |
| SOURCE: 's3://ctds-stata/Stata17Linux64.tar.gz' | |
| DEST: './jupyter-pystata-user-licensed/resources/' | |
| - name: Extract branch name | |
| shell: bash | |
| run: echo "::set-output name=branch::$(echo $(echo ${GITHUB_REF#refs/*/} | tr / _))" | |
| id: extract_branch | |
| - name: Build Image | |
| id: build-image | |
| uses: redhat-actions/buildah-build@v2 | |
| with: | |
| image: jupyter-pystata-user-licensed | |
| tags: ${{ steps.extract_branch.outputs.branch }} | |
| dockerfiles: ./jupyter-pystata-user-licensed/Dockerfile | |
| - name: Push To quay.io | |
| id: push-to-quay | |
| uses: redhat-actions/push-to-registry@v2 | |
| with: | |
| image: ${{ steps.build-image.outputs.image }} | |
| tags: ${{ steps.build-image.outputs.tags }} | |
| registry: quay.io/cdis | |
| username: ${{ secrets.QUAY_SERVICE_ACCOUNT_USER }} | |
| password: ${{ secrets.QUAY_SERVICE_ACCOUNT_PASSWORD }} |