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Migrate content away from Anaconda #782

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bf4ee86
remove anaconda channel from build env
wwarriner Aug 14, 2024
2a1a129
disable warnings for no git revision date
wwarriner Aug 14, 2024
df16e06
change to using_conda.md
wwarriner Aug 14, 2024
47cdc8e
add conda migration faq draft
wwarriner Aug 14, 2024
44dcb84
remove anaconda from using_conda.md
wwarriner Aug 16, 2024
16b5f95
removed anaconda from getting_started page
wwarriner Aug 16, 2024
9968eac
remove anaconda from ood_jupyter
wwarriner Aug 16, 2024
9ca4f8e
remove anaconda from ood_matlab
wwarriner Aug 16, 2024
0e22837
update software/software
wwarriner Aug 16, 2024
4ee8da2
move section to software/software
wwarriner Aug 16, 2024
d90bd87
remove anaconda from ood_r
wwarriner Aug 16, 2024
83eeb51
fix typo
wwarriner Aug 16, 2024
796e5c2
remove anaconda from gpus
wwarriner Aug 16, 2024
6814a9e
remove anaconda from slurm_tutorial
wwarriner Aug 16, 2024
3fbcfd8
remove anaconda from submitting_jobs
wwarriner Aug 16, 2024
bdeec92
remove anaconda from common_software.csv
wwarriner Aug 16, 2024
c27bdd7
remove anaconda from cheaha/tutorial/index
wwarriner Aug 16, 2024
10b26df
update cheaha/tutorial/index
wwarriner Aug 16, 2024
accb89b
update cheaha/tutorial/index
wwarriner Aug 16, 2024
49c42ba
remove anaconda from pytorch_tensorflow tutorial
wwarriner Aug 16, 2024
fcea560
remove anaconda from contributor guide
wwarriner Aug 16, 2024
20acdc5
remove anaconda from storage.md
wwarriner Aug 16, 2024
e1c2a23
remove anaconda from data_management/lts/interfaces.md
wwarriner Aug 16, 2024
463386f
update uab-rc-facilities.txt
wwarriner Aug 16, 2024
f2c86eb
remove anaconda from support.md
wwarriner Aug 16, 2024
df651c4
remove anaconda from uab_cloud/installing_software.md
wwarriner Aug 16, 2024
2aeaa7e
remove anaconda from getting_containers.md
wwarriner Aug 16, 2024
9a3893b
remove anaconda from r_environments.md
wwarriner Aug 16, 2024
3144643
remove anaconda from shell.md
wwarriner Aug 16, 2024
ef60530
removed as much anaconda as I could from using_conda.md
wwarriner Aug 16, 2024
f184f9a
fixed unicode double quote character
wwarriner Aug 16, 2024
0aa4539
remove miniconda from uab_cloud/installing_software
wwarriner Aug 16, 2024
04a0633
Merge branch 'main' into feat-anaconda-to-miniforge
wwarriner Sep 6, 2024
fc08bb1
Merge branch 'main' into feat-anaconda-to-miniforge
wwarriner Oct 4, 2024
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remove anaconda from contributor guide
  • Loading branch information
wwarriner committed Aug 16, 2024
commit fcea560683205eb7c6f47bace215b0329b627205
6 changes: 3 additions & 3 deletions docs/contributing/contributor_guide.md
Original file line number Diff line number Diff line change
Expand Up @@ -36,11 +36,11 @@ If you need assistance, please feel free to [contact us](../help/support.md).

We understand that everyone has differing preferences when it comes to development environments, so please feel free to use the development environment of your choice. Please be aware that our content has been developed using VSCode and a collection of extensions, so the greatest level of support can be provided by us to you if you choose to use our tooling.

We are using Visual Studio Code (VSCode) for development with several extensions installed, listed below. The extensions are also in `.vscode/extensions.json` and should pop up as recommendations when you open this repository. We use VSCode for the productivity benefits related to local Anaconda environment management, git integration, and dynamic formatters and linting. Linting is provided by pre-commit hooks and in our Continuous Integration definitions.
We are using Visual Studio Code (VSCode) for development with several extensions installed, listed below. The extensions are also in `.vscode/extensions.json` and should pop up as recommendations when you open this repository. We use VSCode for the productivity benefits related to local `conda` environment management, git integration, and dynamic formatters and linting. Linting is provided by pre-commit hooks and in our Continuous Integration definitions.

VSCode may be obtained from [Visual Studio Code](https://code.visualstudio.com/) and documentation is available at [VSCode: Docs](https://code.visualstudio.com/docs). The extensions should automatically show up as recommendations when opening the repo, or they can be downloaded using the VSCode Extensions menu (++ctrl+shift+x++ on Windows or ++command+shift+x++ on Mac).

We assume you have a `conda` distribution on your local machine. If you are affiliated with UAB, please install [Miniforge](https://conda-forge.org/miniforge/). For detailed installation instructions, see here: <https://github.com/conda-forge/miniforge/?tab=readme-ov-file#install>. For more information on using `conda`, see our [Anaconda page](../workflow_solutions/using_conda.md).
We assume you have a `conda` distribution on your local machine. If you are affiliated with UAB, please install [Miniforge](https://conda-forge.org/miniforge/) and _do not_ install Anaconda nor Miniconda. For more information on why, please see our [Conda Migration FAQ](../workflow_solutions/conda_migration_faq.md#why-do-i-need-to-stop-using-anaconda). For detailed installation instructions on installing Miniforge, see here: <https://github.com/conda-forge/miniforge/?tab=readme-ov-file#install>. For more information on using `conda`, see our [`conda` page](../workflow_solutions/using_conda.md).

### Style Guide

Expand Down Expand Up @@ -310,7 +310,7 @@ This workaround is needed because `markdownlint` has no plans to add support for
- Main headings are based on [UAB Research Computing services](https://www.uab.edu/it/home/research-computing/research-digital-marketplace)
- Favor placing new pages and information into an existing section over creating
- Approach documentation from a problem solving angle rather than a technology. Examples:
- Section title "Installing Software Yourself with Anaconda" vs "Anaconda"
- Section title "Installing Software Yourself with `conda`" vs "`conda`"
- Section title "Running Analysis Jobs" vs "Slurm"
- Put redirects for any page moves in case someone has bookmarked a page (see Redirect section below)

Expand Down