Project plan

Title: Curating scRNA-seq data of paediatric cancers for pan-paedcancer atlas construction

We have collected 47 paediatric cancer datasets and we aim to integrate them to build an atlas.

Folder structure

pan-paedcancer-scrnaseq/
├── notebooks/ 
│   ├── 01_count_matrix_generation/ # extract count matrices from each available scRNA-seq dataset
│   ├── 02_meta_analysis/ # construct a pan-paedcancer single-cell atlas
├── scripts/