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Replaced calls of DcmXfer::isEncapsulated().
Replaced calls of DcmXfer::isEncapsulated() and isNotEncapsulated() by the new methods such as hasEncapsulatedFormat(), hasNativeFormat() and isPixelDataCompressed(), because they are deprecated. This is another step towards supporting the Encapsulated Uncompressed Explicit VR Little Endian Transfer Syntax (see DCMTK Conformance #1000).
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