Thank you for developing and sharing this valuable software. Regarding the output results of snippy, I have a technical question: while the nucleotide variants and their positions in the query genome (relative to the reference) are clearly provided in the generated files (like core.tab file), I couldn't find corresponding amino acid change annotations (synonymous or nonsynonymous). Could you please clarify whether the software supports this feature? If so, is the absence due to incorrect parameter settings or is this functionality currently unavailable in the present version?
Thank you for developing and sharing this valuable software. Regarding the output results of snippy, I have a technical question: while the nucleotide variants and their positions in the query genome (relative to the reference) are clearly provided in the generated files (like core.tab file), I couldn't find corresponding amino acid change annotations (synonymous or nonsynonymous). Could you please clarify whether the software supports this feature? If so, is the absence due to incorrect parameter settings or is this functionality currently unavailable in the present version?