Al-Murphy / MungeSumstats Star 78 Code Issues Pull requests Rapid standardisation and quality control of GWAS or QTL summary statistics bioinformatics gwas r genomics r-package qtl summary-statistics vcf-files bioconductor-package database-api standardisation Updated Dec 18, 2024 R
cccnrc / plot-VCF Star 31 Code Issues Pull requests Discussions visual analysis of your VCF files visualization genome graph genetics graphics plot vcf variants graphics-programming visual-analysis genome-analysis genome-graph variant-annotations variant-analysis vcf-files plot-generator Updated Dec 3, 2022 R
RajLabMSSM / downloadR Star 0 Code Issues Pull requests echoverse module: Single- and multi-threaded downloading functions. download-manager vcf-files echoverse Updated May 10, 2024 R
MeenaEaswaran / BMI-5331-Foundations-of-Pharmacogenomics Star 0 Code Issues Pull requests This repository contains scripts for VCF-GWAS file processing and microarray dataset differential expression analysis as per course requirements. david differential-expression ncbi-geo limma vcf-files geoquery microarray-data-analysis Updated Jan 8, 2025 R
RajLabMSSM / echotabix Star 0 Code Issues Pull requests echoverse module: Tabix indexing and querying. genomics tabix vcf-files echoverse Updated Nov 17, 2023 R