seqan / seqan Star 496 Code Issues Pull requests SeqAn's official repository. high-performance cpp14 indexing simd alignment bwt fasta blast fastq-format bioinfomatics suffixarray sequence-alignments seqan htslib sam-bam Updated Sep 8, 2025 C++
xxsds / sdsl-lite Star 95 Code Issues Pull requests Discussions Succinct Data Structure Library 3.0 cpp14 indexing data-structures bitvector cpp17 suffixarray cpp-library compressed-suffix-trees fm-index template-library wavelet-tree lcp-array succint-data-structure cpp20 Updated Aug 18, 2025 C++
Tascate / Suffix-Arrays-in-CPP Star 17 Code Issues Pull requests C++ Implementations of Suffix Array Constructions Algorithms for SA-IS and Skew as well as Kasai's algorithm for LCP construction. cpp suffixarray suffix-array Updated May 31, 2021 C++
akamiru / sort Star 4 Code Issues Pull requests three-pivot quicksort + novel linear time suffix array construction algorithm sort suffixarray Updated May 15, 2017 C++
cornerCao / LCS Star 1 Code Issues Pull requests Get the LCS for several strings (more than 2) using suffix array and stack suffixarray longest-common-substring Updated Nov 2, 2017 C++
pptacher / hackerrank Sponsor Star 1 Code Issues Pull requests regular-expression suffixarray longest-common-prefix dc3 deterministic-finite-automaton longest-palindromic-substring Updated May 31, 2020 C++
aminul-islam-niloy / Suffix-Array Star 1 Code Issues Pull requests suffix Array implementation using c++ suffix suffixarray suffix-array Updated Sep 28, 2022 C++
priyendumori / APS_Assignment2 Star 1 Code Issues Pull requests hashing suffixarray quickselect stringbuilder unordered-map Updated Oct 17, 2018 C++