An introduction to matrix factorization and PCA and SVD.
R语言学习笔记——从数据清洗到高级统计学和生物信息学
Tutorial for the analysis of scRNA-seq data in R
Code and manuscript files for Aaron and Karsten's deconvolution paper.
My PhD thesis - "Tools and techniques for single-cell RNA sequencing data"
An archived version of the simpleSingleCell repository, see https://github.com/MarioniLab/simpleSingleCell for the active version.
Code and manuscript files for Aaron's spike-in manuscript.
Code and manuscript files for Aaron and Karsten's deconvolution paper.
This repository contains code for the paper "Conditional resampling improves calibration and sensitivity in single cell CRISPR screen analysis" by Barry et al. 2020.
Files for a Bioconductor workflow for low-level scRNA-seq data analyses.
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