Code for ICLR 2024 (Spotlight) paper "MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding"

Source code for "Learning protein sequence embeddings using information from structure" - ICLR 2019

Multi-task and masked language model-based protein sequence embedding models.

Simple python interface for the OpenProtein.AI REST API.

Generation Co-expression Network Embeddings (CxNEs) for plant genes using Graph Attention Networks (GAT))